7w2i

X-ray diffraction
1.8Å resolution

Crystal structure of LOG (Rv1205) from Mycobacterium tuberculosis

Released:

Function and Biology Details

Reaction catalysed:
N(6)-(Delta(2)-isopentenyl)-adenosine 5'-phosphate + H(2)O = N(6)-(dimethylallyl)adenine + D-ribose 5'-phosphate

Structure analysis Details

Assembly composition:
hetero tetramer (preferred)
PDBe Complex ID:
PDB-CPX-126473 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Cytokinin riboside 5'-monophosphate phosphoribohydrolase Chain: A
Molecule details ›
Chain: A
Length: 183 amino acids
Theoretical weight: 19.61 KDa
Source organism: Mycobacterium tuberculosis
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: O05306 (Residues: 5-187; Coverage: 98%)
Gene names: P425_01253, RVBD_1205, Rv1205, log
Sequence domains: Possible lysine decarboxylase
Cytokinin riboside 5'-monophosphate phosphoribohydrolase Chains: B, C, D
Molecule details ›
Chains: B, C, D
Length: 177 amino acids
Theoretical weight: 19 KDa
Source organism: Mycobacterium tuberculosis
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: O05306 (Residues: 11-187; Coverage: 95%)
Gene names: P425_01253, RVBD_1205, Rv1205, log
Sequence domains: Possible lysine decarboxylase

Ligands and Environments

No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SPRING-8 BEAMLINE BL45XU
Spacegroup: P212121
Unit cell:
a: 67.958Å b: 75.976Å c: 134.953Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.168 0.165 0.214
Expression system: Escherichia coli BL21(DE3)