7whb

Electron Microscopy
2.67Å resolution

SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (3U)

Released:

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero nonamer (preferred)
PDBe Complex ID:
PDB-CPX-276122 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (4 distinct):
Spike glycoprotein Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 1120 amino acids
Theoretical weight: 124.04 KDa
Source organism: Severe acute respiratory syndrome coronavirus 2
Expression system: Trichoplusia ni
antibody ZB8 heavy chain Chains: D, G, J
Molecule details ›
Chains: D, G, J
Length: 224 amino acids
Theoretical weight: 23.47 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
antibody ZB8 light chain Chains: E, H, K

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG
1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 2.67Å
Relevant EMDB volumes: EMD-32498
Expression systems:
  • Trichoplusia ni
  • Homo sapiens