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Local structure of BD55-3500 and omicron RBD complex

Source organisms:
Biochemical function: not assigned
Biological process: not assigned
Cellular component: not assigned

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GO terms

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Sequence family

Pfam Protein family (Pfam)
PF09408
Domain description: Betacoronavirus spike glycoprotein S1, receptor binding
Occurring in:
  1. Spike protein S1
The deposited structure of PDB entry 7wsc contains 1 copy of Pfam domain PF09408 (Betacoronavirus spike glycoprotein S1, receptor binding) in Spike protein S1. Showing 1 copy in chain A [auth R].

InterPro InterPro annotations
IPR013106
Domain description: Immunoglobulin V-set domain
Occurring in:
  1. 3500H
  2. 3500L
IPR018548
Domain description: Spike (S) protein S1 subunit, receptor-binding domain, betacoronavirus
Occurring in:
  1. Spike protein S1
IPR003599
Domain description: Immunoglobulin domain subtype
Occurring in:
  1. 3500H
  2. 3500L
IPR036179
Domain description: Immunoglobulin-like domain superfamily
Occurring in:
  1. 3500H
  2. 3500L
IPR013783
Domain description: Immunoglobulin-like fold
Occurring in:
  1. 3500H
  2. 3500L
IPR007110
Domain description: Immunoglobulin-like domain
Occurring in:
  1. 3500H
  2. 3500L
IPR036326
Domain description: Spike S1 subunit, receptor binding domain superfamily, betacoronavirus
Occurring in:
  1. Spike protein S1
IPR003598
Domain description: Immunoglobulin subtype 2
Occurring in:
  1. 3500H

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