7xcz

Electron Microscopy
3.2Å resolution

Cryo-EM structure of SARS-CoV-2 Delta RBD in complex with BA7054 and BA7125 fab (local refinement)

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero pentamer (preferred)
PDBe Complex ID:
PDB-CPX-535016 (preferred)
Entry contents:
5 distinct polypeptide molecules
Macromolecules (5 distinct):
Spike protein S1 Chain: A
Molecule details ›
Chain: A
Length: 196 amino acids
Theoretical weight: 22.07 KDa
Source organism: Severe acute respiratory syndrome coronavirus 2
Expression system: Homo sapiens
UniProt:
  • Canonical: P0DTC2 (Residues: 333-528; Coverage: 16%)
Gene names: 2, S
Sequence domains: Betacoronavirus spike glycoprotein S1, receptor binding
BA7054 fab Chain: D
Molecule details ›
Chain: D
Length: 224 amino acids
Theoretical weight: 23.71 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
BA7054 fab Chain: E
Molecule details ›
Chain: E
Length: 214 amino acids
Theoretical weight: 23.19 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
BA7125 fab Chain: B
Molecule details ›
Chain: B
Length: 220 amino acids
Theoretical weight: 23.51 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
BA7125 fab Chain: C
Molecule details ›
Chain: C
Length: 215 amino acids
Theoretical weight: 23.33 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.2Å
Relevant EMDB volumes: EMD-33130
Expression system: Homo sapiens