› 7xz7

X-ray diffraction
1.98Å resolution

Mutant (D137A) of the N-terminal domain of fucoidan lyase FdlA

Released:
DOI: 10.2210/pdb7xz7/pdb
PDB entry 7xz7 coloured by chain, front view.
PDB entry 7xz7 coloured by chain, side view.
PDB entry 7xz7 coloured by chain, top view.
Source organism: Flavobacteriaceae bacterium SA-0082
Primary publication:
Structural and Biochemical Analysis Reveals Catalytic Mechanism of Fucoidan Lyase from Flavobacterium sp. SA-0082.
Wang J, Liu Z, Pan X, Wang N, Li L, Du Y, Li J, Li M
OpenAccess logo Mar Drugs 20 (2022)
PMID: 36005536

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-169128 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Fucoidan lyase Chains: A, B
Molecule details ›
Chains: A, B
Length: 463 amino acids
Theoretical weight: 50.21 KDa
Source organism: Flavobacteriaceae bacterium SA-0082
Expression system: Escherichia coli

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRF BEAMLINE BL19U1
Spacegroup: P1
Unit cell:
a: 54.551Å b: 58.386Å c: 88.287Å
α: 90.165° β: 101.917° γ: 92.251°
R-values:
R R work R free
0.158 0.156 0.198
Expression system: Escherichia coli

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