7yh6

Electron Microscopy
3.4Å resolution

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero trimer (preferred)
PDBe Complex ID:
PDB-CPX-233251 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
NIV-8 Fab light chain Chain: L
Molecule details ›
Chain: L
Length: 111 amino acids
Theoretical weight: 11.7 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
NIV-8 Fab heavy chain Chain: H
Molecule details ›
Chain: H
Length: 125 amino acids
Theoretical weight: 13.75 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
Spike protein S1 Chain: A
Molecule details ›
Chain: A
Length: 194 amino acids
Theoretical weight: 21.78 KDa
Source organism: Severe acute respiratory syndrome coronavirus 2
Expression system: Drosophila melanogaster
UniProt:
  • Canonical: P0DTC2 (Residues: 333-526; Coverage: 15%)
Gene names: 2, S
Sequence domains: Betacoronavirus spike glycoprotein S1, receptor binding

Ligands and Environments

1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.4Å
Relevant EMDB volumes: EMD-33820
Expression systems:
  • Homo sapiens
  • Drosophila melanogaster