› 7ymz

Electron Microscopy
4.39Å resolution

Cryo-EM structure of MERS-CoV spike protein, intermediate conformation

Released:
DOI: 10.2210/pdb7ymz/pdb
PDB entry 7ymz coloured by chain, front view.
PDB entry 7ymz coloured by chain, side view.
PDB entry 7ymz coloured by chain, top view.
Source organism: Human betacoronavirus 2c EMC/2012
Entry authors: Hsu STD, Chang NE, Weng ZW, Yang TJ, Draczkowski P
Related structures: EMD-33948

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-125457 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecules (4 distinct):
Spike glycoprotein Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 1369 amino acids
Theoretical weight: 150.65 KDa
Source organism: Human betacoronavirus 2c EMC/2012
Expression system: Homo sapiens
UniProt:
  • Canonical: K0BRG7 (Residues: 17-1291; Coverage: 94%)
Gene name: S
Sequence domains:

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG
Carbohydrate polymer
Carbohydrate polymer : NEW Components: NAG, BMA, MAN
Carbohydrate polymer
Carbohydrate polymer : NEW Components: NAG, FUC
Carbohydrate polymer
1 bound ligand:
Ligand NAG 12 x NAG
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 4.39Å
Relevant EMDB volumes: EMD-33948
Expression system: Homo sapiens

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