7yqy

Electron Microscopy
3.74Å resolution

SARS-CoV-2 BA.2.75 S Trimer in complex with S309 (state2)

Released:

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero nonamer (preferred)
PDBe Complex ID:
PDB-CPX-225414 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (5 distinct):
Spike glycoprotein Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 1270 amino acids
Theoretical weight: 141.13 KDa
Source organism: Severe acute respiratory syndrome coronavirus 2
Expression system: Homo sapiens
S309 light chain Chains: E, F, G
Molecule details ›
Chains: E, F, G
Length: 214 amino acids
Theoretical weight: 23.2 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
S309 heavy chain Chains: H, I, J
Molecule details ›
Chains: H, I, J
Length: 126 amino acids
Theoretical weight: 13.92 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG
Carbohydrate polymer : NEW Components: NAG, BMA, FUC
1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.74Å
Relevant EMDB volumes: EMD-34039
Expression system: Homo sapiens