› 7zzz

Electron Microscopy
4.1Å resolution

Bacteriophage phiCjT23 capsid

Released:
DOI: 10.2210/pdb7zzz/pdb
PDB entry 7zzz coloured by chain, front view.
PDB entry 7zzz coloured by chain, side view.
PDB entry 7zzz coloured by chain, top view.
Source organisms:
Primary publication:
Cryo-EM structure of ssDNA bacteriophage ΦCjT23 provides insight into early virus evolution.
Kejzar N, Laanto E, Rissanen I, Abrishami V, Selvaraj M, Moineau S, Ravantti J, Sundberg LR, Huiskonen JT
OpenAccess logo Nat Commun 13 7478 (2022)
PMID: 36463224
Related structures: EMD-15042

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero 720-mer (preferred)
PDBe Complex ID:
PDB-CPX-221593 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
Major capsid protein Chains: A, B, C, D, E, F, G, H, I, J
Molecule details ›
Chains: A, B, C, D, E, F, G, H, I, J
Length: 239 amino acids
Theoretical weight: 26.18 KDa
Source organism: Flavobacterium phage FL-1
UniProt:
  • Canonical: A0A9E7D7B0 (Residues: 1-239; Coverage: 100%)
Gene name: phicjt23_gp05
Spike protein Chain: P
Molecule details ›
Chain: P
Length: 91 amino acids
Theoretical weight: 10.44 KDa
Source organism: Flavobacterium phage FL-1
UniProt:
  • Canonical: A0A9E7A4L7 (Residues: 1-91; Coverage: 32%)
Gene name: phicjt23_gp13
Unknown vertex protein Chain: X
Molecule details ›
Chain: X
Length: 5 amino acids
Theoretical weight: 444 Da
Source organism: unidentified

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 4.1Å
Relevant EMDB volumes: EMD-15042

Quick links

Citations

1 citations in other articles

Jorvik: A membrane-containing phage that will likely found a new family within Vinavirales.
Bárdy et al. (2023)