› 8g5b

Electron Microscopy
3.1Å resolution

Influenza A H3N2 X-31 Hemagglutinin in complex with FL-1061

Released:
DOI: 10.2210/pdb8g5b/pdb
PDB entry 8g5b coloured by chain, front view.
PDB entry 8g5b coloured by chain, side view.
PDB entry 8g5b coloured by chain, top view.
Source organisms:
Entry authors: Windsor IW, Thornlow D, Schmidt AG
Related structures: EMD-29738

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:

Structure analysis Details

Assembly composition:
hetero heptamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-240204 (preferred)
Entry contents:
7 distinct polypeptide molecules
Macromolecules (7 distinct):
Hemagglutinin HA1 chain Chain: A
Molecule details ›
Chain: A
Length: 386 amino acids
Theoretical weight: 41.64 KDa
Source organism: Influenza A virus
Expression system: Trichoplusia ni
UniProt:
  • Canonical: P03437 (Residues: 53-335; Coverage: 52%)
Gene name: HA
Sequence domains: Haemagglutinin
FL-1086 heavy chain Chain: H
Molecule details ›
Chain: H
Length: 265 amino acids
Theoretical weight: 28.5 KDa
Source organism: Mus musculus
Expression system: Homo sapiens
FL-1061 heavy chain Chain: I
Molecule details ›
Chain: I
Length: 266 amino acids
Theoretical weight: 28.1 KDa
Source organism: Mus musculus
Expression system: Homo sapiens
S5V2-29 heavy chain Chain: J
Molecule details ›
Chain: J
Length: 241 amino acids
Theoretical weight: 25.98 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
FL-1086 light chain Chain: L
Molecule details ›
Chain: L
Length: 241 amino acids
Theoretical weight: 26.26 KDa
Source organism: Mus musculus
Expression system: Homo sapiens
FL-1061 light chain Chain: M
Molecule details ›
Chain: M
Length: 236 amino acids
Theoretical weight: 25.77 KDa
Source organism: Mus musculus
Expression system: Homo sapiens
S5V2-29 light chain Chain: N
Molecule details ›
Chain: N
Length: 210 amino acids
Theoretical weight: 22.8 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens

Ligands and Environments

1 bound ligand:
Ligand NAG 2 x NAG
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.1Å
Relevant EMDB volumes: EMD-29738
Expression systems:
  • Trichoplusia ni
  • Homo sapiens

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