8gjm

Electron Microscopy
2.8Å resolution

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero pentamer (preferred)
PDBe Complex ID:
PDB-CPX-279756 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (6 distinct):
Spike glycoprotein Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 1310 amino acids
Theoretical weight: 144.86 KDa
Source organism: Severe acute respiratory syndrome coronavirus 2
Expression system: Homo sapiens
UniProt:
  • Canonical: P0DTC2 (Residues: 1-1273; Coverage: 100%)
Gene names: 2, S
Sequence domains:
Heavy chain of 17B10 fab Chain: D
Molecule details ›
Chain: D
Length: 138 amino acids
Theoretical weight: 15.35 KDa
Source organism: Mus musculus
Expression system: Homo sapiens
Light chain of 17B10 fab Chain: E
Molecule details ›
Chain: E
Length: 127 amino acids
Theoretical weight: 14.09 KDa
Source organism: Mus musculus
Expression system: Homo sapiens

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG
Carbohydrate polymer : NEW Components: NAG, FUC
Carbohydrate polymer : NEW Components: NAG, MAN
1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 2.8Å
Relevant EMDB volumes: EMD-40094
Expression system: Homo sapiens