8vyf

Electron Microscopy
3.2Å resolution

Function and Biology Details

Biochemical function:
  • not assigned
Cellular component:

Structure analysis Details

Assembly composition:
hetero pentamer (preferred)
PDBe Complex ID:
PDB-CPX-535195 (preferred)
Entry contents:
5 distinct polypeptide molecules
Macromolecules (7 distinct):
Spike glycoprotein Chain: A
Molecule details ›
Chain: A
Length: 1270 amino acids
Theoretical weight: 140.93 KDa
Source organism: Severe acute respiratory syndrome coronavirus 2
Expression system: Homo sapiens
UniProt:
  • Canonical: P0DTC2 (Residues: 1-1208; Coverage: 94%)
Gene names: 2, S
Sequence domains:
S2L20 Heavy Chain Chain: B
Molecule details ›
Chain: B
Length: 122 amino acids
Theoretical weight: 13.54 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
S2L20 Light Chain Chain: C
Molecule details ›
Chain: C
Length: 107 amino acids
Theoretical weight: 11.83 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
S2X303 Heavy Chain Chain: H
Molecule details ›
Chain: H
Length: 125 amino acids
Theoretical weight: 13.74 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
S2X303 Light Chain Chain: L
Molecule details ›
Chain: L
Length: 105 amino acids
Theoretical weight: 11.27 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG, BMA
Carbohydrate polymer : NEW Components: NAG
1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.2Å
Relevant EMDB volumes: EMD-43659
Expression system: Homo sapiens