› 8xse

Electron Microscopy
2.5Å resolution

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero pentamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-247153 (preferred)
Entry contents:
5 distinct polypeptide molecules
Macromolecules (5 distinct):
Spike protein S1 Chain: A
Molecule details ›
Chain: A
Length: 209 amino acids
Theoretical weight: 23.51 KDa
Source organism: Severe acute respiratory syndrome coronavirus 2
Expression system: Homo sapiens
UniProt:
  • Canonical: P0DTC2 (Residues: 319-527; Coverage: 17%)
Gene names: 2, S
Sequence domains: Betacoronavirus spike glycoprotein S1, receptor binding
IMCAS-123 H chain Chain: H
Molecule details ›
Chain: H
Length: 226 amino acids
Theoretical weight: 23.92 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
IMCAS-123 L chain Chain: L
Molecule details ›
Chain: L
Length: 215 amino acids
Theoretical weight: 23.26 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
IMCAS-72 H chain Chain: M
Molecule details ›
Chain: M
Length: 226 amino acids
Theoretical weight: 24.11 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
IMCAS-72 L chain Chain: N
Molecule details ›
Chain: N
Length: 215 amino acids
Theoretical weight: 23.38 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens

Ligands and Environments

1 bound ligand:
Ligand NAG 1 x NAG
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 2.5Å
Relevant EMDB volumes: EMD-38617
Expression system: Homo sapiens

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