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CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : snoRNA MUTANT

Source organism: Leishmania major strain Friedlin
Biochemical function: structural constituent of ribosome
Biological process: translation
Cellular component: ribosome

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GO terms

Biochemical function:
Biological process:
Cellular component:

Sequence families

Pfam Protein families (Pfam)
PF00400
Domain description: WD domain, G-beta repeat
Occurring in:
  1. Activated protein kinase c receptor (LACK)
The deposited structure of PDB entry 8a98 contains 6 copies of Pfam domain PF00400 (WD domain, G-beta repeat) in Activated protein kinase c receptor (LACK). Showing 6 copies in chain P [auth Sg].

PF00467
Domain description: KOW motif
Occurring in:
  1. Putative 40S ribosomal protein L14
  2. 40S ribosomal protein S4
  3. KOW domain-containing protein
  4. KOW domain-containing protein
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00467 (KOW motif) in 40S ribosomal protein S4. Showing 1 copy in chain M [auth SE].
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00467 (KOW motif) in Putative 40S ribosomal protein L14. Showing 1 copy in chain IB [auth K].
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00467 (KOW motif) in KOW domain-containing protein. Showing 1 copy in chain LB [auth Y].
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00467 (KOW motif) in KOW domain-containing protein. Showing 1 copy in chain SB [auth W].

PF01248
Domain description: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
Occurring in:
  1. 60S ribosomal protein L7a
  2. 40S ribosomal protein S12
  3. Ribosomal protein eL8/eL30/eS12/Gadd45 domain-containing protein
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01248 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family) in 40S ribosomal protein S12. Showing 1 copy in chain U [auth SQ].
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01248 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family) in Ribosomal protein eL8/eL30/eS12/Gadd45 domain-containing protein. Showing 1 copy in chain KA [auth d].
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01248 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family) in 60S ribosomal protein L7a. Showing 1 copy in chain XA [auth G].

PF01479
Domain description: S4 domain
Occurring in:
  1. Putative 40S ribosomal protein S9
  2. 40S ribosomal protein S4
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01479 (S4 domain) in Putative 40S ribosomal protein S9. Showing 1 copy in chain L [auth SD].
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01479 (S4 domain) in 40S ribosomal protein S4. Showing 1 copy in chain M [auth SE].

PF00318
Domain description: Ribosomal protein S2
Occurring in:
  1. Small ribosomal subunit protein uS2
The deposited structure of PDB entry 8a98 contains 2 copies of Pfam domain PF00318 (Ribosomal protein S2) in Small ribosomal subunit protein uS2. Showing 2 copies in chain J [auth SB].

PF00347
Domain description: Ribosomal protein L6
Occurring in:
  1. Large ribosomal subunit protein uL6 alpha-beta domain-containing protein
The deposited structure of PDB entry 8a98 contains 2 copies of Pfam domain PF00347 (Ribosomal protein L6) in Large ribosomal subunit protein uL6 alpha-beta domain-containing protein. Showing 2 copies in chain EB [auth E].

PF00935
Domain description: Ribosomal protein L44
Occurring in:
  1. Putative 60S ribosomal protein L44
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00935 (Ribosomal protein L44) in Putative 60S ribosomal protein L44. Showing 1 copy in chain VB [auth p].

PF01780
Domain description: Ribosomal L37ae protein family
Occurring in:
  1. Putative 60S ribosomal protein L37a
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01780 (Ribosomal L37ae protein family) in Putative 60S ribosomal protein L37a. Showing 1 copy in chain WB [auth o].

PF00832
Domain description: Ribosomal L39 protein
Occurring in:
  1. Putative 60S ribosomal protein L39
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00832 (Ribosomal L39 protein) in Putative 60S ribosomal protein L39. Showing 1 copy in chain ZB [auth l].

PF01781
Domain description: Ribosomal L38e protein family
Occurring in:
  1. Putative ribosomal protein L38
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01781 (Ribosomal L38e protein family) in Putative ribosomal protein L38. Showing 1 copy in chain YB [auth k].

PF01907
Domain description: Ribosomal protein L37e
Occurring in:
  1. Ribosomal protein L37
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01907 (Ribosomal protein L37e) in Ribosomal protein L37. Showing 1 copy in chain EC [auth j].

PF01158
Domain description: Ribosomal protein L36e
Occurring in:
  1. Putative 60S Ribosomal protein L36
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01158 (Ribosomal protein L36e) in Putative 60S Ribosomal protein L36. Showing 1 copy in chain UB [auth i].

PF01199
Domain description: Ribosomal protein L34e
Occurring in:
  1. Putative 60S ribosomal protein L34
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01199 (Ribosomal protein L34e) in Large ribosomal subunit protein eL34. Showing 1 copy in chain OB [auth h].

PF01247
Domain description: Ribosomal protein L35Ae
Occurring in:
  1. Putative ribosomal protein l35a
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01247 (Ribosomal protein L35Ae) in Putative ribosomal protein l35a. Showing 1 copy in chain PB [auth g].

PF01655
Domain description: Ribosomal protein L32
Occurring in:
  1. 60S ribosomal protein L32
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01655 (Ribosomal protein L32) in 60S ribosomal protein L32. Showing 1 copy in chain JA [auth f].

PF01198
Domain description: Ribosomal protein L31e
Occurring in:
  1. Putative 60S ribosomal subunit protein L31
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01198 (Ribosomal protein L31e) in Putative 60S ribosomal subunit protein L31. Showing 1 copy in chain DC [auth e].

PF00327
Domain description: Ribosomal protein L30p/L7e
Occurring in:
  1. Putative 60S ribosomal protein L7
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00327 (Ribosomal protein L30p/L7e) in Putative 60S ribosomal protein L7. Showing 1 copy in chain LA [auth c].

PF08079
Domain description: Ribosomal L30 N-terminal domain
Occurring in:
  1. Putative 60S ribosomal protein L7
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF08079 (Ribosomal L30 N-terminal domain) in Putative 60S ribosomal protein L7. Showing 1 copy in chain LA [auth c].

PF01779
Domain description: Ribosomal L29e protein family
Occurring in:
  1. 60S ribosomal protein L29
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01779 (Ribosomal L29e protein family) in 60S ribosomal protein L29. Showing 1 copy in chain NA [auth b].

PF00831
Domain description: Ribosomal L29 protein
Occurring in:
  1. Putative 60S ribosomal protein L35
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00831 (Ribosomal L29 protein) in Putative 60S ribosomal protein L35. Showing 1 copy in chain MA [auth a].

PF01778
Domain description: Ribosomal L28e protein family
Occurring in:
  1. Ribosomal eL28/Mak16 domain-containing protein
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01778 (Ribosomal L28e protein family) in Large ribosomal subunit protein eL28. Showing 1 copy in chain MB [auth Z].

PF01777
Domain description: Ribosomal L27e protein family
Occurring in:
  1. KOW domain-containing protein
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01777 (Ribosomal L27e protein family) in KOW domain-containing protein. Showing 1 copy in chain LB [auth Y].

PF01246
Domain description: Ribosomal protein L24e
Occurring in:
  1. Large ribosomal subunit protein eL24-related N-terminal domain-containing protein
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01246 (Ribosomal protein L24e) in Putative ribosomal protein L24. Showing 1 copy in chain XB [auth X].

PF16906
Domain description: Ribosomal proteins L26 eukaryotic, L24P archaeal
Occurring in:
  1. KOW domain-containing protein
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF16906 (Ribosomal proteins L26 eukaryotic, L24P archaeal) in KOW domain-containing protein. Showing 1 copy in chain SB [auth W].

PF00276
Domain description: Ribosomal protein L23
Occurring in:
  1. Putative 60S ribosomal protein L23a
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00276 (Ribosomal protein L23) in Putative 60S ribosomal protein L23a. Showing 1 copy in chain RB [auth V].

PF01776
Domain description: Ribosomal L22e protein family
Occurring in:
  1. Large ribosomal subunit protein eL22
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01776 (Ribosomal L22e protein family) in Large ribosomal subunit protein eL22. Showing 1 copy in chain TB [auth U].

PF00237
Domain description: Ribosomal protein L22p/L17e
Occurring in:
  1. Putative 60S ribosomal protein L17
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00237 (Ribosomal protein L22p/L17e) in Putative 60S ribosomal protein L17. Showing 1 copy in chain GB [auth T].

PF00076
Domain description: RNA recognition motif
Occurring in:
  1. RRM domain-containing protein
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00076 (RNA recognition motif) in RRM domain-containing protein. Showing 1 copy in chain IA [auth Sh] (this domain is out of the observed residue ranges!).

PF04758
Domain description: Ribosomal protein S30
Occurring in:
  1. 40S ribosomal protein S30
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF04758 (Ribosomal protein S30) in 40S ribosomal protein S30. Showing 1 copy in chain S [auth Se].

PF01200
Domain description: Ribosomal protein S28e
Occurring in:
  1. Putative 40S ribosomal protein S33
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01200 (Ribosomal protein S28e) in Putative 40S ribosomal protein S33. Showing 1 copy in chain Y [auth Sd].

PF01667
Domain description: Ribosomal protein S27
Occurring in:
  1. 40S ribosomal protein S27-1
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01667 (Ribosomal protein S27) in 40S ribosomal protein S27-1. Showing 1 copy in chain R [auth Sc].

PF01283
Domain description: Ribosomal protein S26e
Occurring in:
  1. 40S ribosomal protein S26
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01283 (Ribosomal protein S26e) in 40S ribosomal protein S26. Showing 1 copy in chain HA [auth Sb].

PF03297
Domain description: S25 ribosomal protein
Occurring in:
  1. 40S ribosomal protein S25
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF03297 (S25 ribosomal protein) in 40S ribosomal protein S25. Showing 1 copy in chain Q [auth Sa].

PF01282
Domain description: Ribosomal protein S24e
Occurring in:
  1. 40S ribosomal protein S24
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01282 (Ribosomal protein S24e) in 40S ribosomal protein S24. Showing 1 copy in chain B [auth SZ].

PF01249
Domain description: Ribosomal protein S21e
Occurring in:
  1. Putative 40S ribosomal protein S21
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01249 (Ribosomal protein S21e ) in Putative 40S ribosomal protein S21. Showing 1 copy in chain C [auth SY].

PF01090
Domain description: Ribosomal protein S19e
Occurring in:
  1. 40S ribosomal protein S19-like protein
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01090 (Ribosomal protein S19e) in 40S ribosomal protein S19-like protein. Showing 1 copy in chain D [auth SX].

PF00203
Domain description: Ribosomal protein S19
Occurring in:
  1. Putative 40S ribosomal protein S15
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00203 (Ribosomal protein S19) in Putative 40S ribosomal protein S15. Showing 1 copy in chain A [auth SW].

PF00833
Domain description: Ribosomal S17
Occurring in:
  1. Putative 40S ribosomal protein S17
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00833 (Ribosomal S17) in Putative 40S ribosomal protein S17. Showing 1 copy in chain E [auth SV].

PF00312
Domain description: Ribosomal protein S15
Occurring in:
  1. Small ribosomal subunit protein uS15 N-terminal domain-containing protein
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00312 (Ribosomal protein S15) in Small ribosomal subunit protein uS15 N-terminal domain-containing protein. Showing 1 copy in chain G [auth ST].

PF08069
Domain description: Ribosomal S13/S15 N-terminal domain
Occurring in:
  1. Small ribosomal subunit protein uS15 N-terminal domain-containing protein
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF08069 (Ribosomal S13/S15 N-terminal domain) in Small ribosomal subunit protein uS15 N-terminal domain-containing protein. Showing 1 copy in chain G [auth ST].

PF00253
Domain description: Ribosomal protein S14p/S29e
Occurring in:
  1. Putative ribosomal protein S29
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00253 (Ribosomal protein S14p/S29e) in Putative ribosomal protein S29. Showing 1 copy in chain H [auth SS].

PF00416
Domain description: Ribosomal protein S13/S18
Occurring in:
  1. Ribosomal protein S18
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00416 (Ribosomal protein S13/S18) in Ribosomal protein S18. Showing 1 copy in chain I [auth SR].

PF00164
Domain description: Ribosomal protein S12/S23
Occurring in:
  1. Putative 40S ribosomal protein S23
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00164 (Ribosomal protein S12/S23) in Putative 40S ribosomal protein S23. Showing 1 copy in chain V [auth SP].

PF00411
Domain description: Ribosomal protein S11
Occurring in:
  1. 40S ribosomal protein S14
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00411 (Ribosomal protein S11) in 40S ribosomal protein S14. Showing 1 copy in chain W [auth SO].

PF03501
Domain description: Plectin/S10 domain
Occurring in:
  1. Plectin/eS10 N-terminal domain-containing protein
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF03501 (Plectin/S10 domain) in Plectin/eS10 N-terminal domain-containing protein. Showing 1 copy in chain X [auth SN].

PF00338
Domain description: Ribosomal protein S10p/S20e
Occurring in:
  1. Small ribosomal subunit protein uS10 domain-containing protein
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00338 (Ribosomal protein S10p/S20e) in Small ribosomal subunit protein uS10 domain-containing protein. Showing 1 copy in chain Z [auth SM].

PF00380
Domain description: Ribosomal protein S9/S16
Occurring in:
  1. Ribosomal protein S16
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00380 (Ribosomal protein S9/S16) in Putative 40S ribosomal protein S16. Showing 1 copy in chain AA [auth SL].

PF01201
Domain description: Ribosomal protein S8e
Occurring in:
  1. Small ribosomal subunit protein eS8
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01201 (Ribosomal protein S8e) in Small ribosomal subunit protein eS8. Showing 1 copy in chain N [auth SK].

PF00410
Domain description: Ribosomal protein S8
Occurring in:
  1. Putative 40S ribosomal protein S15A
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00410 (Ribosomal protein S8) in Putative 40S ribosomal protein S15A. Showing 1 copy in chain BA [auth SJ].

PF01251
Domain description: Ribosomal protein S7e
Occurring in:
  1. 40S ribosomal protein S7
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01251 (Ribosomal protein S7e) in 40S ribosomal protein S7. Showing 1 copy in chain CA [auth SI].

PF00177
Domain description: Ribosomal protein S7p/S5e
Occurring in:
  1. Small ribosomal subunit protein uS7 domain-containing protein
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00177 (Ribosomal protein S7p/S5e) in Small ribosomal subunit protein uS7 domain-containing protein. Showing 1 copy in chain DA [auth SH].

PF01092
Domain description: Ribosomal protein S6e
Occurring in:
  1. Small ribosomal subunit protein eS6
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01092 (Ribosomal protein S6e) in Small ribosomal subunit protein eS6. Showing 1 copy in chain EA [auth SG].

PF03719
Domain description: Ribosomal protein S5, C-terminal domain
Occurring in:
  1. Small ribosomal subunit protein uS5
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF03719 (Ribosomal protein S5, C-terminal domain) in S5 DRBM domain-containing protein. Showing 1 copy in chain FA [auth SF].

PF00333
Domain description: Ribosomal protein S5, N-terminal domain
Occurring in:
  1. Small ribosomal subunit protein uS5
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00333 (Ribosomal protein S5, N-terminal domain) in S5 DRBM domain-containing protein. Showing 1 copy in chain FA [auth SF].

PF16121
Domain description: 40S ribosomal protein S4 C-terminus
Occurring in:
  1. 40S ribosomal protein S4
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF16121 (40S ribosomal protein S4 C-terminus) in 40S ribosomal protein S4. Showing 1 copy in chain M [auth SE].

PF00900
Domain description: Ribosomal family S4e
Occurring in:
  1. 40S ribosomal protein S4
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00900 (Ribosomal family S4e) in 40S ribosomal protein S4. Showing 1 copy in chain M [auth SE].

PF08071
Domain description: RS4NT (NUC023) domain
Occurring in:
  1. 40S ribosomal protein S4
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF08071 (RS4NT (NUC023) domain) in 40S ribosomal protein S4. Showing 1 copy in chain M [auth SE].

PF00163
Domain description: Ribosomal protein S4/S9 N-terminal domain
Occurring in:
  1. Putative 40S ribosomal protein S9
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00163 (Ribosomal protein S4/S9 N-terminal domain) in Putative 40S ribosomal protein S9. Showing 1 copy in chain L [auth SD].

PF00189
Domain description: Ribosomal protein S3, C-terminal domain
Occurring in:
  1. 40S ribosomal protein S3
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00189 (Ribosomal protein S3, C-terminal domain) in 40S ribosomal protein S3. Showing 1 copy in chain K [auth SC].

PF07650
Domain description: KH domain
Occurring in:
  1. 40S ribosomal protein S3
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF07650 (KH domain) in 40S ribosomal protein S3. Showing 1 copy in chain K [auth SC].

PF01015
Domain description: Ribosomal S3Ae family
Occurring in:
  1. Small ribosomal subunit protein eS1
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01015 (Ribosomal S3Ae family) in Small ribosomal subunit protein eS1. Showing 1 copy in chain GA [auth SA].

PF01157
Domain description: Ribosomal protein L21e
Occurring in:
  1. Putative 60S ribosomal protein L21
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01157 (Ribosomal protein L21e) in Putative 60S ribosomal protein L21. Showing 1 copy in chain HB [auth S].

PF01775
Domain description: Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A
Occurring in:
  1. 60S ribosomal protein L18a
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01775 (Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A) in 60S ribosomal protein L18a. Showing 1 copy in chain DB [auth R].

PF01280
Domain description: Ribosomal protein L19e
Occurring in:
  1. Large ribosomal subunit protein eL19 domain-containing protein
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01280 (Ribosomal protein L19e) in Large ribosomal subunit protein eL19 domain-containing protein. Showing 1 copy in chain CB [auth Q].

PF17135
Domain description: Ribosomal protein 60S L18 and 50S L18e
Occurring in:
  1. Large ribosomal subunit protein eL18
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF17135 (Ribosomal protein 60S L18 and 50S L18e) in Large ribosomal subunit protein eL18. Showing 1 copy in chain BB [auth P].

PF14204
Domain description: Ribosomal L18 C-terminal region
Occurring in:
  1. Large ribosomal subunit protein uL18 C-terminal eukaryotes domain-containing protein
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF14204 (Ribosomal L18 C-terminal region) in Large ribosomal subunit protein uL18 C-terminal eukaryotes domain-containing protein. Showing 1 copy in chain WA [auth O].

PF17144
Domain description: Ribosomal large subunit proteins 60S L5, and 50S L18
Occurring in:
  1. Large ribosomal subunit protein uL18 C-terminal eukaryotes domain-containing protein
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF17144 (Ribosomal large subunit proteins 60S L5, and 50S L18) in Large ribosomal subunit protein uL18 C-terminal eukaryotes domain-containing protein. Showing 1 copy in chain WA [auth O].

PF00827
Domain description: Ribosomal L15
Occurring in:
  1. Ribosomal protein L15
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00827 (Ribosomal L15) in Ribosomal protein L15. Showing 1 copy in chain ZA [auth M].

PF00828
Domain description: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
Occurring in:
  1. Large ribosomal subunit protein uL15/eL18 domain-containing protein
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00828 (Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A) in Large ribosomal subunit protein uL15/eL18 domain-containing protein. Showing 1 copy in chain KB [auth L].

PF01929
Domain description: Ribosomal protein L14
Occurring in:
  1. Putative 40S ribosomal protein L14
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01929 (Ribosomal protein L14) in Putative 40S ribosomal protein L14. Showing 1 copy in chain IB [auth K].

PF00238
Domain description: Ribosomal protein L14p/L23e
Occurring in:
  1. Putative 60S ribosomal protein L23
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00238 (Ribosomal protein L14p/L23e) in Putative 60S ribosomal protein L23. Showing 1 copy in chain QB [auth J].

PF01294
Domain description: Ribosomal protein L13e
Occurring in:
  1. Putative 60S ribosomal protein L13
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01294 (Ribosomal protein L13e) in Putative 60S ribosomal protein L13. Showing 1 copy in chain AB [auth I].

PF00572
Domain description: Ribosomal protein L13
Occurring in:
  1. Putative 60S ribosomal protein L13a
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00572 (Ribosomal protein L13) in Putative 60S ribosomal protein L13a. Showing 1 copy in chain YA [auth H].

PF01159
Domain description: Ribosomal protein L6e
Occurring in:
  1. Putative 60S ribosomal protein L6
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF01159 (Ribosomal protein L6e ) in Putative 60S ribosomal protein L6. Showing 1 copy in chain NB [auth F].

PF00673
Domain description: ribosomal L5P family C-terminus
Occurring in:
  1. Large ribosomal subunit protein uL5
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00673 (ribosomal L5P family C-terminus) in Large ribosomal subunit protein uL5. Showing 1 copy in chain JB [auth D].

PF00281
Domain description: Ribosomal protein L5
Occurring in:
  1. Large ribosomal subunit protein uL5
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00281 (Ribosomal protein L5) in Large ribosomal subunit protein uL5. Showing 1 copy in chain JB [auth D].

PF14374
Domain description: 60S ribosomal protein L4 C-terminal domain
Occurring in:
  1. Large ribosomal subunit protein uL4 C-terminal domain-containing protein
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF14374 (60S ribosomal protein L4 C-terminal domain) in Large ribosomal subunit protein uL4 C-terminal domain-containing protein. Showing 1 copy in chain BC [auth C].

PF00573
Domain description: Ribosomal protein L4/L1 family
Occurring in:
  1. Large ribosomal subunit protein uL4 C-terminal domain-containing protein
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00573 (Ribosomal protein L4/L1 family) in Large ribosomal subunit protein uL4 C-terminal domain-containing protein. Showing 1 copy in chain BC [auth C].

PF00297
Domain description: Ribosomal protein L3
Occurring in:
  1. Putative ribosomal protein L3
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00297 (Ribosomal protein L3) in Ribosomal protein L3. Showing 1 copy in chain SA [auth B].

PF03947
Domain description: Ribosomal Proteins L2, C-terminal domain
Occurring in:
  1. Large ribosomal subunit protein uL2 C-terminal domain-containing protein
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF03947 (Ribosomal Proteins L2, C-terminal domain) in Large ribosomal subunit protein uL2 C-terminal domain-containing protein. Showing 1 copy in chain VA [auth A].

PF00181
Domain description: Ribosomal Proteins L2, RNA binding domain
Occurring in:
  1. Large ribosomal subunit protein uL2 C-terminal domain-containing protein
The deposited structure of PDB entry 8a98 contains 1 copy of Pfam domain PF00181 (Ribosomal Proteins L2, RNA binding domain) in Large ribosomal subunit protein uL2 C-terminal domain-containing protein. Showing 1 copy in chain VA [auth A].

Rfam RNA families (Rfam)
RF02543
Domain description: Eukaryotic large subunit ribosomal RNA
Occurring in:
  1. LSUa_rRNA_chain_1
  2. LSUb_rRNA_chain_2
  3. SR2_chain_4
The deposited structure of PDB entry 8a98 contains 1 copy of Rfam domain RF02543 (Eukaryotic large subunit ribosomal RNA) in LSUa_rRNA_chain_1. Showing 1 copy in chain OA [auth 1].
The deposited structure of PDB entry 8a98 contains 1 copy of Rfam domain RF02543 (Eukaryotic large subunit ribosomal RNA) in LSUb_rRNA_chain_2. Showing 1 copy in chain PA [auth 2].
The deposited structure of PDB entry 8a98 contains 1 copy of Rfam domain RF02543 (Eukaryotic large subunit ribosomal RNA) in SR2_chain_4. Showing 1 copy in chain QA [auth 4].

RF00002
Domain description: 5.8S ribosomal RNA
Occurring in:
  1. 5.8S_rRNA_chain_7
The deposited structure of PDB entry 8a98 contains 1 copy of Rfam domain RF00002 (5.8S ribosomal RNA) in 5.8S_rRNA_chain_7. Showing 1 copy in chain RA [auth 7].

RF00001
Domain description: 5S ribosomal RNA
Occurring in:
  1. 5S_rRNA_chain_8
The deposited structure of PDB entry 8a98 contains 1 copy of Rfam domain RF00001 (5S ribosomal RNA) in 5S_rRNA_chain_8. Showing 1 copy in chain TA [auth 8].

RF01960
Domain description: Eukaryotic small subunit ribosomal RNA
Occurring in:
  1. SSU_rRNA_chain_S1
The deposited structure of PDB entry 8a98 contains 1 copy of Rfam domain RF01960 (Eukaryotic small subunit ribosomal RNA) in SSU_rRNA_chain_S1. Showing 1 copy in chain T [auth S1].

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