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Yeast RQC complex in state H

Source organism: Saccharomyces cerevisiae
Biochemical function: structural constituent of ribosome
Biological process: cytoplasmic translation
Cellular component: cytoplasm

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EC 2.3.2.27: RING-type E3 ubiquitin transferase

Reaction catalysed:
S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine
Systematic name:
[E2 ubiquitin-conjugating enzyme]-S-ubiquitinyl-L-cysteine:[acceptor protein]-L-lysine ubiquitin transferase (isopeptide bond-forming; RING-type)
Alternative Name(s):
  • RING E3 ligase
  • Ubiquitin transferase RING E3

GO terms

Biochemical function:
Biological process:
Cellular component:

Sequence families

Pfam Protein families (Pfam)
PF00347
Domain description: Ribosomal protein L6
Occurring in:
  1. Large ribosomal subunit protein uL6A
The deposited structure of PDB entry 8agv contains 2 copies of Pfam domain PF00347 (Ribosomal protein L6) in Large ribosomal subunit protein uL6A. Showing 2 copies in chain NA [auth q].

PF01248
Domain description: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
Occurring in:
  1. Large ribosomal subunit protein eL30
  2. Large ribosomal subunit protein eL8A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF01248 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family) in Large ribosomal subunit protein eL30. Showing 1 copy in chain P.
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF01248 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family) in Large ribosomal subunit protein eL8A. Showing 1 copy in chain MA [auth p].

PF00467
Domain description: KOW motif
Occurring in:
  1. Large ribosomal subunit protein uL24A
  2. Large ribosomal subunit protein eL14A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF00467 (KOW motif) in Large ribosomal subunit protein uL24A. Showing 1 copy in chain L.
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF00467 (KOW motif) in Large ribosomal subunit protein eL14A. Showing 1 copy in chain RA [auth u].

PF00298
Domain description: Ribosomal protein L11, RNA binding domain
Occurring in:
  1. Large ribosomal subunit protein uL11B
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF00298 (Ribosomal protein L11, RNA binding domain) in RPL12A isoform 1. Showing 1 copy in chain YA [auth z].

PF03946
Domain description: Ribosomal protein L11, N-terminal domain
Occurring in:
  1. Large ribosomal subunit protein uL11B
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF03946 (Ribosomal protein L11, N-terminal domain) in RPL12A isoform 1. Showing 1 copy in chain YA [auth z].

PF00687
Domain description: Ribosomal protein L1p/L10e family
Occurring in:
  1. Large ribosomal subunit protein uL1A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF00687 (Ribosomal protein L1p/L10e family) in Large ribosomal subunit protein uL1A. Showing 1 copy in chain VA [auth w].

PF01287
Domain description: Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold
Occurring in:
  1. Eukaryotic translation initiation factor 5A-1
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF01287 (Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold) in Eukaryotic translation initiation factor 5A-1. Showing 1 copy in chain BB [auth v].

PF21485
Domain description: Translation initiation factor 5A-like, N-terminal
Occurring in:
  1. Eukaryotic translation initiation factor 5A-1
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF21485 (Translation initiation factor 5A-like, N-terminal) in Eukaryotic translation initiation factor 5A-1. Showing 1 copy in chain BB [auth v].

PF01929
Domain description: Ribosomal protein L14
Occurring in:
  1. Large ribosomal subunit protein eL14A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF01929 (Ribosomal protein L14) in Large ribosomal subunit protein eL14A. Showing 1 copy in chain RA [auth u].

PF01294
Domain description: Ribosomal protein L13e
Occurring in:
  1. Large ribosomal subunit protein eL13A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF01294 (Ribosomal protein L13e) in Large ribosomal subunit protein eL13A. Showing 1 copy in chain QA [auth t].

PF00673
Domain description: ribosomal L5P family C-terminus
Occurring in:
  1. Large ribosomal subunit protein uL5A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF00673 (ribosomal L5P family C-terminus) in Large ribosomal subunit protein uL5A. Showing 1 copy in chain PA [auth s].

PF00281
Domain description: Ribosomal protein L5
Occurring in:
  1. Large ribosomal subunit protein uL5A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF00281 (Ribosomal protein L5) in Large ribosomal subunit protein uL5A. Showing 1 copy in chain PA [auth s].

PF00252
Domain description: Ribosomal protein L16p/L10e
Occurring in:
  1. Large ribosomal subunit protein uL16
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF00252 (Ribosomal protein L16p/L10e) in RPL10 isoform 1. Showing 1 copy in chain OA [auth r].

PF00327
Domain description: Ribosomal protein L30p/L7e
Occurring in:
  1. Large ribosomal subunit protein uL30A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF00327 (Ribosomal protein L30p/L7e) in Large ribosomal subunit protein uL30A. Showing 1 copy in chain LA [auth o].

PF08079
Domain description: Ribosomal L30 N-terminal domain
Occurring in:
  1. Large ribosomal subunit protein uL30A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF08079 (Ribosomal L30 N-terminal domain) in Large ribosomal subunit protein uL30A. Showing 1 copy in chain LA [auth o].

PF01159
Domain description: Ribosomal protein L6e
Occurring in:
  1. Large ribosomal subunit protein eL6B
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF01159 (Ribosomal protein L6e ) in Large ribosomal subunit protein eL6B. Showing 1 copy in chain KA [auth n].

PF14204
Domain description: Ribosomal L18 C-terminal region
Occurring in:
  1. Large ribosomal subunit protein uL18
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF14204 (Ribosomal L18 C-terminal region) in Large ribosomal subunit protein uL18 C-terminal eukaryotes domain-containing protein. Showing 1 copy in chain JA [auth m].

PF17144
Domain description: Ribosomal large subunit proteins 60S L5, and 50S L18
Occurring in:
  1. Large ribosomal subunit protein uL18
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF17144 (Ribosomal large subunit proteins 60S L5, and 50S L18) in Large ribosomal subunit protein uL18 C-terminal eukaryotes domain-containing protein. Showing 1 copy in chain JA [auth m].

PF14374
Domain description: 60S ribosomal protein L4 C-terminal domain
Occurring in:
  1. Large ribosomal subunit protein uL4A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF14374 (60S ribosomal protein L4 C-terminal domain) in Large ribosomal subunit protein uL4A. Showing 1 copy in chain IA [auth l].

PF00573
Domain description: Ribosomal protein L4/L1 family
Occurring in:
  1. Large ribosomal subunit protein uL4A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF00573 (Ribosomal protein L4/L1 family) in Large ribosomal subunit protein uL4A. Showing 1 copy in chain IA [auth l].

PF00297
Domain description: Ribosomal protein L3
Occurring in:
  1. Large ribosomal subunit protein uL3
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF00297 (Ribosomal protein L3) in Large ribosomal subunit protein uL3. Showing 1 copy in chain HA [auth k].

PF03947
Domain description: Ribosomal Proteins L2, C-terminal domain
Occurring in:
  1. Large ribosomal subunit protein uL2A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF03947 (Ribosomal Proteins L2, C-terminal domain) in Large ribosomal subunit protein uL2A. Showing 1 copy in chain GA [auth j].

PF00181
Domain description: Ribosomal Proteins L2, RNA binding domain
Occurring in:
  1. Large ribosomal subunit protein uL2A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF00181 (Ribosomal Proteins L2, RNA binding domain) in Large ribosomal subunit protein uL2A. Showing 1 copy in chain GA [auth j].

PF01912
Domain description: eIF-6 family
Occurring in:
  1. Eukaryotic translation initiation factor 6
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF01912 (eIF-6 family) in Eukaryotic translation initiation factor 6. Showing 1 copy in chain UA [auth g].

PF13639
Domain description: Ring finger domain
Occurring in:
  1. E3 ubiquitin-protein ligase listerin
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF13639 (Ring finger domain) in E3 ubiquitin-protein ligase listerin. Showing 1 copy in chain TA [auth e].

PF23009
Domain description: Ubiquitin conjugating domain-like
Occurring in:
  1. E3 ubiquitin-protein ligase listerin

PF22999
Domain description: LTN1 family HEAT repeat region
Occurring in:
  1. E3 ubiquitin-protein ligase listerin

PF22958
Domain description: E3 ubiquitin-protein ligase listerin, N-terminal domain
Occurring in:
  1. E3 ubiquitin-protein ligase listerin

PF05162
Domain description: Ribosomal protein L41
Occurring in:
  1. Small ribosomal subunit protein eS32A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF05162 (Ribosomal protein L41) in Large ribosomal subunit protein eL41A. Showing 1 copy in chain CA [auth d].

PF01780
Domain description: Ribosomal L37ae protein family
Occurring in:
  1. Large ribosomal subunit protein eL43A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF01780 (Ribosomal L37ae protein family) in Large ribosomal subunit protein eL43A. Showing 1 copy in chain BA [auth c].

PF00935
Domain description: Ribosomal protein L44
Occurring in:
  1. Large ribosomal subunit protein eL42A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF00935 (Ribosomal protein L44) in Large ribosomal subunit protein eL42A. Showing 1 copy in chain AA [auth b].

PF11923
Domain description: NFACT protein C-terminal domain
Occurring in:
  1. Ribosome quality control complex subunit 2
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF11923 (NFACT protein C-terminal domain) in Ribosome quality control complex subunit 2. Showing 1 copy in chain SA [auth a].

PF05670
Domain description: NFACT protein RNA binding domain
Occurring in:
  1. Ribosome quality control complex subunit 2
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF05670 (NFACT protein RNA binding domain) in Ribosome quality control complex subunit 2. Showing 1 copy in chain SA [auth a].

PF05833
Domain description: NFACT N-terminal and middle domains
Occurring in:
  1. Ribosome quality control complex subunit 2
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF05833 (NFACT N-terminal and middle domains) in Ribosome quality control complex subunit 2. Showing 1 copy in chain SA [auth a].

PF01020
Domain description: Ribosomal L40e family
Occurring in:
  1. Ubiquitin-ribosomal protein eL40A fusion protein
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF01020 (Ribosomal L40e family) in Ubiquitin-ribosomal protein eL40A fusion protein. Showing 1 copy in chain Z.

PF00240
Domain description: Ubiquitin family
Occurring in:
  1. Ubiquitin-ribosomal protein eL40A fusion protein
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF00240 (Ubiquitin family) in Ubiquitin-ribosomal protein eL40A fusion protein. Showing 1 copy in chain Z (this domain is out of the observed residue ranges!).

PF00832
Domain description: Ribosomal L39 protein
Occurring in:
  1. Large ribosomal subunit protein eL39
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF00832 (Ribosomal L39 protein) in Large ribosomal subunit protein eL39. Showing 1 copy in chain Y.

PF01781
Domain description: Ribosomal L38e protein family
Occurring in:
  1. Large ribosomal subunit protein eL38
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF01781 (Ribosomal L38e protein family) in Large ribosomal subunit protein eL38. Showing 1 copy in chain X.

PF01907
Domain description: Ribosomal protein L37e
Occurring in:
  1. Large ribosomal subunit protein eL37A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF01907 (Ribosomal protein L37e) in Large ribosomal subunit protein eL37A. Showing 1 copy in chain W.

PF01158
Domain description: Ribosomal protein L36e
Occurring in:
  1. Large ribosomal subunit protein eL36A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF01158 (Ribosomal protein L36e) in Large ribosomal subunit protein eL36A. Showing 1 copy in chain V.

PF00831
Domain description: Ribosomal L29 protein
Occurring in:
  1. Large ribosomal subunit protein uL29A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF00831 (Ribosomal L29 protein) in Large ribosomal subunit protein uL29A. Showing 1 copy in chain U.

PF01199
Domain description: Ribosomal protein L34e
Occurring in:
  1. Large ribosomal subunit protein eL34A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF01199 (Ribosomal protein L34e) in Large ribosomal subunit protein eL34A. Showing 1 copy in chain T.

PF01247
Domain description: Ribosomal protein L35Ae
Occurring in:
  1. Large ribosomal subunit protein eL33A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF01247 (Ribosomal protein L35Ae) in Large ribosomal subunit protein eL33A. Showing 1 copy in chain S.

PF01655
Domain description: Ribosomal protein L32
Occurring in:
  1. Large ribosomal subunit protein eL32
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF01655 (Ribosomal protein L32) in Large ribosomal subunit protein eL32. Showing 1 copy in chain R.

PF01198
Domain description: Ribosomal protein L31e
Occurring in:
  1. Large ribosomal subunit protein eL31A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF01198 (Ribosomal protein L31e) in Large ribosomal subunit protein eL31A. Showing 1 copy in chain Q.

PF01779
Domain description: Ribosomal L29e protein family
Occurring in:
  1. Large ribosomal subunit protein eL29
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF01779 (Ribosomal L29e protein family) in 60S ribosomal protein L29. Showing 1 copy in chain O.

PF00828
Domain description: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
Occurring in:
  1. Large ribosomal subunit protein uL15
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF00828 (Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A) in Large ribosomal subunit protein uL15. Showing 1 copy in chain N.

PF01777
Domain description: Ribosomal L27e protein family
Occurring in:
  1. Large ribosomal subunit protein eL27A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF01777 (Ribosomal L27e protein family) in Large ribosomal subunit protein eL27A. Showing 1 copy in chain M.

PF16906
Domain description: Ribosomal proteins L26 eukaryotic, L24P archaeal
Occurring in:
  1. Large ribosomal subunit protein uL24A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF16906 (Ribosomal proteins L26 eukaryotic, L24P archaeal) in Large ribosomal subunit protein uL24A. Showing 1 copy in chain L.

PF00276
Domain description: Ribosomal protein L23
Occurring in:
  1. Large ribosomal subunit protein uL23
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF00276 (Ribosomal protein L23) in Large ribosomal subunit protein uL23. Showing 1 copy in chain K.

PF03939
Domain description: Ribosomal protein L23, N-terminal domain
Occurring in:
  1. Large ribosomal subunit protein uL23
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF03939 (Ribosomal protein L23, N-terminal domain) in Large ribosomal subunit protein uL23. Showing 1 copy in chain K.

PF01246
Domain description: Ribosomal protein L24e
Occurring in:
  1. Large ribosomal subunit protein eL24A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF01246 (Ribosomal protein L24e) in Large ribosomal subunit protein eL24A. Showing 1 copy in chain J.

PF00238
Domain description: Ribosomal protein L14p/L23e
Occurring in:
  1. Large ribosomal subunit protein uL14A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF00238 (Ribosomal protein L14p/L23e) in Large ribosomal subunit protein uL14A. Showing 1 copy in chain I.

PF01776
Domain description: Ribosomal L22e protein family
Occurring in:
  1. Large ribosomal subunit protein eL22A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF01776 (Ribosomal L22e protein family) in Large ribosomal subunit protein eL22A. Showing 1 copy in chain H.

PF01157
Domain description: Ribosomal protein L21e
Occurring in:
  1. Large ribosomal subunit protein eL21A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF01157 (Ribosomal protein L21e) in Large ribosomal subunit protein eL21A. Showing 1 copy in chain G.

PF01775
Domain description: Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A
Occurring in:
  1. Large ribosomal subunit protein eL20A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF01775 (Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A) in Large ribosomal subunit protein eL20A. Showing 1 copy in chain F.

PF01280
Domain description: Ribosomal protein L19e
Occurring in:
  1. Large ribosomal subunit protein eL19A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF01280 (Ribosomal protein L19e) in Large ribosomal subunit protein eL19A. Showing 1 copy in chain E.

PF17135
Domain description: Ribosomal protein 60S L18 and 50S L18e
Occurring in:
  1. Large ribosomal subunit protein eL18A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF17135 (Ribosomal protein 60S L18 and 50S L18e) in Large ribosomal subunit protein eL18A. Showing 1 copy in chain D.

PF00237
Domain description: Ribosomal protein L22p/L17e
Occurring in:
  1. Large ribosomal subunit protein uL22A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF00237 (Ribosomal protein L22p/L17e) in Large ribosomal subunit protein uL22A. Showing 1 copy in chain C.

PF00572
Domain description: Ribosomal protein L13
Occurring in:
  1. Large ribosomal subunit protein uL13A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF00572 (Ribosomal protein L13) in Large ribosomal subunit protein uL13A. Showing 1 copy in chain B.

PF00827
Domain description: Ribosomal L15
Occurring in:
  1. Large ribosomal subunit protein eL15A
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF00827 (Ribosomal L15) in Large ribosomal subunit protein eL15A. Showing 1 copy in chain A.

PF00428
Domain description: 60s Acidic ribosomal protein
Occurring in:
  1. Large ribosomal subunit protein uL10
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF00428 (60s Acidic ribosomal protein) in Large ribosomal subunit protein uL10. Showing 1 copy in chain ZA [auth 0] (this domain is out of the observed residue ranges!).

PF17777
Domain description: Insertion domain in 60S ribosomal protein L10P
Occurring in:
  1. Large ribosomal subunit protein uL10
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF17777 (Insertion domain in 60S ribosomal protein L10P) in Large ribosomal subunit protein uL10. Showing 1 copy in chain ZA [auth 0] (this domain is out of the observed residue ranges!).

PF00466
Domain description: Ribosomal protein L10
Occurring in:
  1. Large ribosomal subunit protein uL10
The deposited structure of PDB entry 8agv contains 1 copy of Pfam domain PF00466 (Ribosomal protein L10) in Large ribosomal subunit protein uL10. Showing 1 copy in chain ZA [auth 0].

Rfam RNA families (Rfam)
RF02543
Domain description: Eukaryotic large subunit ribosomal RNA
Occurring in:
  1. 25S ribosomal RNA
The deposited structure of PDB entry 8agv contains 1 copy of Rfam domain RF02543 (Eukaryotic large subunit ribosomal RNA) in 25S ribosomal RNA. Showing 1 copy in chain DA [auth f].

RF00001
Domain description: 5S ribosomal RNA
Occurring in:
  1. 5S ribosomal RNA
The deposited structure of PDB entry 8agv contains 1 copy of Rfam domain RF00001 (5S ribosomal RNA) in 5S ribosomal RNA. Showing 1 copy in chain EA [auth h].

RF00002
Domain description: 5.8S ribosomal RNA
Occurring in:
  1. 5.8S ribosomal RNA
The deposited structure of PDB entry 8agv contains 1 copy of Rfam domain RF00002 (5.8S ribosomal RNA) in 5.8S ribosomal RNA. Showing 1 copy in chain FA [auth i].

RF00005
Domain description: tRNA
Occurring in:
  1. Ala tRNA
The deposited structure of PDB entry 8agv contains 2 copies of Rfam domain RF00005 (tRNA) in Ala tRNA. Showing 1 copy in chain WA [auth x].

InterPro InterPro annotations
IPR005485
Domain description: Large ribosomal subunit protein uL18 eukaryotic/archaeal
Occurring in:
  1. Large ribosomal subunit protein uL18
IPR001921
Domain description: Large ribosomal subunit protein eL8
Occurring in:
  1. Large ribosomal subunit protein eL8A
IPR002769
Domain description: Translation initiation factor IF6
Occurring in:
  1. Eukaryotic translation initiation factor 6
IPR008991
Domain description: Translation protein SH3-like domain superfamily
Occurring in:
  1. Large ribosomal subunit protein eL21A
  2. Large ribosomal subunit protein uL24A
  3. Large ribosomal subunit protein eL27A
  4. Large ribosomal subunit protein uL2A
  5. Large ribosomal subunit protein eL6B
  6. Large ribosomal subunit protein eL14A
  7. Eukaryotic translation initiation factor 5A-1
IPR008195
Domain description: Large ribosomal subunit protein eL34
Occurring in:
  1. Large ribosomal subunit protein eL34A
IPR014722
Domain description: Large ribosomal subunit protein uL2, domain 2
Occurring in:
  1. Large ribosomal subunit protein uL24A
  2. Large ribosomal subunit protein uL2A
  3. Large ribosomal subunit protein eL6B
  4. Large ribosomal subunit protein eL14A
  5. Eukaryotic translation initiation factor 5A-1
IPR000911
Domain description: Ribosomal protein uL11
Occurring in:
  1. Large ribosomal subunit protein uL11B
IPR018492
Domain description: Ribosomal protein eL8/Nhp2 family
Occurring in:
  1. Large ribosomal subunit protein eL8A
IPR012340
Domain description: Nucleic acid-binding, OB-fold
Occurring in:
  1. Large ribosomal subunit protein uL2A
  2. Eukaryotic translation initiation factor 5A-1
IPR000054
Domain description: Large ribosomal subunit protein eL31
Occurring in:
  1. Large ribosomal subunit protein eL31A
IPR029064
Domain description: Ribosomal protein eL30-like superfamily
Occurring in:
  1. Large ribosomal subunit protein eL30
  2. Large ribosomal subunit protein eL8A
IPR005822
Domain description: Large ribosomal subunit protein uL13
Occurring in:
  1. Large ribosomal subunit protein uL13A
IPR001884
Domain description: Translation elongation factor IF5A-like
Occurring in:
  1. Eukaryotic translation initiation factor 5A-1
IPR001380
Domain description: Large ribosomal subunit protein eL13
Occurring in:
  1. Large ribosomal subunit protein eL13A
IPR036789
Domain description: Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL6A
IPR036919
Domain description: Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL30A
IPR000915
Domain description: Large ribosomal subunit protein eL6
Occurring in:
  1. Large ribosomal subunit protein eL6B
IPR002171
Domain description: Large ribosomal subunit protein uL2
Occurring in:
  1. Large ribosomal subunit protein uL2A
IPR002674
Domain description: Large ribosomal subunit protein eL43
Occurring in:
  1. Large ribosomal subunit protein eL43A
IPR000552
Domain description: Large ribosomal subunit protein eL42
Occurring in:
  1. Large ribosomal subunit protein eL42A
IPR019956
Domain description: Ubiquitin domain
Occurring in:
  1. Ubiquitin-ribosomal protein eL40A fusion protein
IPR000626
Domain description: Ubiquitin-like domain
Occurring in:
  1. Ubiquitin-ribosomal protein eL40A fusion protein
IPR011332
Domain description: Zinc-binding ribosomal protein
Occurring in:
  1. Large ribosomal subunit protein eL37A
  2. Large ribosomal subunit protein eL42A
  3. Large ribosomal subunit protein eL43A
IPR000509
Domain description: Large ribosomal subunit protein eL36
Occurring in:
  1. Large ribosomal subunit protein eL36A
IPR001854
Domain description: Large ribosomal subunit protein uL29
Occurring in:
  1. Large ribosomal subunit protein uL29A
IPR001780
Domain description: Large ribosomal subunit protein eL33
Occurring in:
  1. Large ribosomal subunit protein eL33A
IPR001515
Domain description: Large ribosomal subunit protein eL32
Occurring in:
  1. Large ribosomal subunit protein eL32
IPR005756
Domain description: Large ribosomal subunit protein uL24, eukaryotic/archaeal
Occurring in:
  1. Large ribosomal subunit protein uL24A
IPR013025
Domain description: Large ribosomal subunit protein uL23-like
Occurring in:
  1. Large ribosomal subunit protein uL23
IPR000988
Domain description: Large ribosomal subunit protein eL24-related
Occurring in:
  1. Large ribosomal subunit protein eL24A
IPR000218
Domain description: Large ribosomal subunit protein uL14
Occurring in:
  1. Large ribosomal subunit protein uL14A
IPR000196
Domain description: Large ribosomal subunit protein eL19 domain
Occurring in:
  1. Large ribosomal subunit protein eL19A
IPR000439
Domain description: Large ribosomal subunit protein eL15
Occurring in:
  1. Large ribosomal subunit protein eL15A
IPR036769
Domain description: Large ribosomal subunit protein uL11, C-terminal domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL11B
IPR036796
Domain description: Large ribosomal subunit protein uL11, N-terminal domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL11B
IPR028364
Domain description: Ribosomal protein uL1/ribosomal biogenesis protein
Occurring in:
  1. Large ribosomal subunit protein uL1A
IPR022803
Domain description: Large ribosomal subunit protein uL5 domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL5A
IPR002132
Domain description: Large ribosomal subunit protein uL5
Occurring in:
  1. Large ribosomal subunit protein uL5A
IPR036920
Domain description: Large ribosomal subunit protein uL16 superfamily
Occurring in:
  1. Large ribosomal subunit protein uL16
IPR001197
Domain description: Large ribosomal subunit protein uL16, eukaryotes/archaea
Occurring in:
  1. Large ribosomal subunit protein uL16
IPR020040
Domain description: Large ribosomal subunit protein uL6, alpha-beta domain
Occurring in:
  1. Large ribosomal subunit protein uL6A
IPR023574
Domain description: Large ribosomal subunit protein uL4 domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL4A
IPR022669
Domain description: Large ribosomal subunit protein uL2, C-terminal
Occurring in:
  1. Large ribosomal subunit protein uL2A
IPR001841
Domain description: Zinc finger, RING-type
Occurring in:
  1. E3 ubiquitin-protein ligase listerin
IPR001975
Domain description: Large ribosomal subunit protein eL40 domain
Occurring in:
  1. Ubiquitin-ribosomal protein eL40A fusion protein
IPR023626
Domain description: Large ribosomal subunit protein eL39 domain superfamily
Occurring in:
  1. Large ribosomal subunit protein eL39
IPR000077
Domain description: Large ribosomal subunit protein eL39
Occurring in:
  1. Large ribosomal subunit protein eL39
IPR002675
Domain description: Large ribosomal subunit protein eL38
Occurring in:
  1. Large ribosomal subunit protein eL38
IPR001569
Domain description: Large ribosomal subunit protein eL37
Occurring in:
  1. Large ribosomal subunit protein eL37A
IPR011331
Domain description: Large ribosomal subunit protein eL37/eL43
Occurring in:
  1. Large ribosomal subunit protein eL37A
  2. Large ribosomal subunit protein eL43A
IPR036049
Domain description: Large ribosomal subunit protein uL29 superfamily
Occurring in:
  1. Large ribosomal subunit protein uL29A
IPR009000
Domain description: Translation protein, beta-barrel domain superfamily
Occurring in:
  1. Large ribosomal subunit protein eL33A
  2. Large ribosomal subunit protein uL3
IPR023621
Domain description: Large ribosomal subunit protein eL31 domain superfamily
Occurring in:
  1. Large ribosomal subunit protein eL31A
IPR022991
Domain description: Large ribosomal subunit protein eL30, conserved site
Occurring in:
  1. Large ribosomal subunit protein eL30
IPR004038
Domain description: Ribosomal protein eL8/eL30/eS12/Gadd45
Occurring in:
  1. Large ribosomal subunit protein eL30
  2. Large ribosomal subunit protein eL8A
IPR002673
Domain description: Large ribosomal subunit protein eL29
Occurring in:
  1. Large ribosomal subunit protein eL29
IPR001141
Domain description: Large ribosomal subunit protein eL27
Occurring in:
  1. Large ribosomal subunit protein eL27A
IPR036853
Domain description: Large ribosomal subunit protein uL14 superfamily
Occurring in:
  1. Large ribosomal subunit protein uL14A
IPR002671
Domain description: Large ribosomal subunit protein eL22
Occurring in:
  1. Large ribosomal subunit protein eL22A
IPR001147
Domain description: Large ribosomal subunit protein eL21
Occurring in:
  1. Large ribosomal subunit protein eL21A
IPR021138
Domain description: Large ribosomal subunit protein eL20, eukaryotes
Occurring in:
  1. Large ribosomal subunit protein eL20A
IPR036227
Domain description: Large ribosomal subunit protein uL15/eL18 superfamily
Occurring in:
  1. Large ribosomal subunit protein eL18A
  2. Large ribosomal subunit protein uL15
IPR021131
Domain description: Large ribosomal subunit protein uL15/eL18
Occurring in:
  1. Large ribosomal subunit protein eL18A
  2. Large ribosomal subunit protein uL15
IPR001063
Domain description: Large ribosomal subunit protein uL22
Occurring in:
  1. Large ribosomal subunit protein uL22A
IPR036394
Domain description: Ribosomal protein uL22 superfamily
Occurring in:
  1. Large ribosomal subunit protein uL22A
IPR005721
Domain description: Large ribosomal subunit protein uL22, eukaryotic/archaeal
Occurring in:
  1. Large ribosomal subunit protein uL22A
IPR036899
Domain description: Large ribosomal subunit protein uL13 superfamily
Occurring in:
  1. Large ribosomal subunit protein uL13A
IPR012678
Domain description: Ribosomal protein uL23/eL15/eS24 core domain superfamily
Occurring in:
  1. Large ribosomal subunit protein eL15A
  2. Large ribosomal subunit protein uL23
IPR043141
Domain description: Large ribosomal subunit protein uL10-like domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL10
IPR020785
Domain description: Large ribosomal subunit protein uL11, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL11B
IPR020783
Domain description: Large ribosomal subunit protein uL11, C-terminal
Occurring in:
  1. Large ribosomal subunit protein uL11B
IPR020784
Domain description: Large ribosomal subunit protein uL11, N-terminal
Occurring in:
  1. Large ribosomal subunit protein uL11B
IPR023673
Domain description: Large ribosomal subunit protein uL1, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL1A
IPR016095
Domain description: Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain
Occurring in:
  1. Large ribosomal subunit protein uL1A
IPR023674
Domain description: Ribosomal protein uL1-like
Occurring in:
  1. Large ribosomal subunit protein uL1A
IPR002143
Domain description: Large ribosomal subunit protein uL1
Occurring in:
  1. Large ribosomal subunit protein uL1A
IPR020189
Domain description: Translation elongation factor, IF5A C-terminal
Occurring in:
  1. Eukaryotic translation initiation factor 5A-1
IPR019769
Domain description: Translation elongation factor, IF5A, hypusine site
Occurring in:
  1. Eukaryotic translation initiation factor 5A-1
IPR002784
Domain description: Large ribosomal subunit protein eL14 domain
Occurring in:
  1. Large ribosomal subunit protein eL14A
IPR041985
Domain description: Large ribosomal subunit protein eL14, KOW motif
Occurring in:
  1. Large ribosomal subunit protein eL14A
IPR039660
Domain description: Large ribosomal subunit protein eL14
Occurring in:
  1. Large ribosomal subunit protein eL14A
IPR018256
Domain description: Large ribosomal subunit protein eL13, conserved site
Occurring in:
  1. Large ribosomal subunit protein eL13A
IPR031309
Domain description: Large ribosomal subunit protein uL5, C-terminal
Occurring in:
  1. Large ribosomal subunit protein uL5A
IPR020929
Domain description: Large ribosomal subunit protein uL5, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL5A
IPR031310
Domain description: Large ribosomal subunit protein uL5, N-terminal
Occurring in:
  1. Large ribosomal subunit protein uL5A
IPR018255
Domain description: Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaea
Occurring in:
  1. Large ribosomal subunit protein uL16
IPR016180
Domain description: Large ribosomal subunit protein uL16 domain
Occurring in:
  1. Large ribosomal subunit protein uL16
IPR047873
Domain description: Large ribosomal subunit protein uL16
Occurring in:
  1. Large ribosomal subunit protein uL16
IPR002359
Domain description: Large ribosomal subunit protein uL6, conserved site-2
Occurring in:
  1. Large ribosomal subunit protein uL6A
IPR000702
Domain description: Large ribosomal subunit protein uL6-like
Occurring in:
  1. Large ribosomal subunit protein uL6A
IPR004037
Domain description: Large ribosomal subunit protein eL8-like, conserved site
Occurring in:
  1. Large ribosomal subunit protein eL8A
IPR018038
Domain description: Large ribosomal subunit protein uL30, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL30A
IPR016082
Domain description: Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain
Occurring in:
  1. Large ribosomal subunit protein uL30A
IPR035808
Domain description: Large ribosomal subunit protein uL30, eukaryotic/archaeal
Occurring in:
  1. Large ribosomal subunit protein uL30A
IPR012988
Domain description: Large ribosomal subunit protein uL30, N-terminal, eukaryotes
Occurring in:
  1. Large ribosomal subunit protein uL30A
IPR005998
Domain description: Large ribosomal subunit protein uL30, eukaryotic
Occurring in:
  1. Large ribosomal subunit protein uL30A
IPR039699
Domain description: Large ribosomal subunit protein uL30
Occurring in:
  1. Large ribosomal subunit protein uL30A
IPR041997
Domain description: Large ribosomal subunit protein eL6, KOW domain
Occurring in:
  1. Large ribosomal subunit protein eL6B
IPR025607
Domain description: Large ribosomal subunit protein uL18, C-terminal, eukaryotes
Occurring in:
  1. Large ribosomal subunit protein uL18
IPR025755
Domain description: Large ribosomal subunit protein uL4, C-terminal domain
Occurring in:
  1. Large ribosomal subunit protein uL4A
IPR013000
Domain description: Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL4A
IPR002136
Domain description: Large ribosomal subunit protein uL4
Occurring in:
  1. Large ribosomal subunit protein uL4A
IPR045240
Domain description: Large ribosomal subunit protein uL4, eukaryotic and archaeal type
Occurring in:
  1. Large ribosomal subunit protein uL4A
IPR019926
Domain description: Large ribosomal subunit protein uL3, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL3
IPR045077
Domain description: Large ribosomal subunit protein uL3, archaeal/eukaryotic-type
Occurring in:
  1. Large ribosomal subunit protein uL3
IPR044892
Domain description: Ribosomal protein L3, domain 3, archaeal-type superfamily
Occurring in:
  1. Large ribosomal subunit protein uL3
IPR000597
Domain description: Large ribosomal subunit protein uL3
Occurring in:
  1. Large ribosomal subunit protein uL3
IPR022671
Domain description: Large ribosomal subunit protein uL2, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL2A
IPR014726
Domain description: Large ribosomal subunit protein uL2, domain 3
Occurring in:
  1. Large ribosomal subunit protein uL2A
IPR022666
Domain description: Large ribosomal subunit protein uL2, RNA-binding domain
Occurring in:
  1. Large ribosomal subunit protein uL2A
IPR011016
Domain description: Zinc finger, RING-CH-type
Occurring in:
  1. E3 ubiquitin-protein ligase listerin
IPR039804
Domain description: Listerin, zinc finger, RING-type
Occurring in:
  1. E3 ubiquitin-protein ligase listerin
IPR013083
Domain description: Zinc finger, RING/FYVE/PHD-type
Occurring in:
  1. E3 ubiquitin-protein ligase listerin
IPR039795
Domain description: E3 ubiquitin-protein ligase listerin
Occurring in:
  1. E3 ubiquitin-protein ligase listerin
IPR016024
Domain description: Armadillo-type fold
Occurring in:
  1. E3 ubiquitin-protein ligase listerin
IPR007836
Domain description: Large ribosomal subunit protein eS32
Occurring in:
  1. Small ribosomal subunit protein eS32A
IPR021846
Domain description: NFACT protein, C-terminal
Occurring in:
  1. Ribosome quality control complex subunit 2
IPR008532
Domain description: NFACT, RNA-binding domain
Occurring in:
  1. Ribosome quality control complex subunit 2
IPR038587
Domain description: Large ribosomal subunit protein eL40 superfamily
Occurring in:
  1. Ubiquitin-ribosomal protein eL40A fusion protein
IPR019954
Domain description: Ubiquitin conserved site
Occurring in:
  1. Ubiquitin-ribosomal protein eL40A fusion protein
IPR029071
Domain description: Ubiquitin-like domain superfamily
Occurring in:
  1. Ubiquitin-ribosomal protein eL40A fusion protein
IPR020083
Domain description: Large ribosomal subunit protein eL39, conserved site
Occurring in:
  1. Large ribosomal subunit protein eL39
IPR038464
Domain description: Large ribosomal subunit protein eL38 superfamily
Occurring in:
  1. Large ribosomal subunit protein eL38
IPR018267
Domain description: Large ribosomal subunit protein eL37, conserved site
Occurring in:
  1. Large ribosomal subunit protein eL37A
IPR038097
Domain description: Large ribosomal subunit protein eL36 domain superfamily
Occurring in:
  1. Large ribosomal subunit protein eL36A
IPR018254
Domain description: Large ribosomal subunit protein uL29, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL29A
IPR045059
Domain description: Large ribosomal subunit protein uL29, eukaryotes
Occurring in:
  1. Large ribosomal subunit protein uL29A
IPR018065
Domain description: Large ribosomal subunit protein eL34, conserved site
Occurring in:
  1. Large ribosomal subunit protein eL34A
IPR018266
Domain description: Large ribosomal subunit protein eL33, conserved site
Occurring in:
  1. Large ribosomal subunit protein eL33A
IPR038661
Domain description: Large ribosomal subunit protein eL33 superfamily
Occurring in:
  1. Large ribosomal subunit protein eL33A
IPR018263
Domain description: Large ribosomal subunit protein eL32, conserved site
Occurring in:
  1. Large ribosomal subunit protein eL32
IPR036351
Domain description: Large ribosomal subunit protein eL32 superfamily
Occurring in:
  1. Large ribosomal subunit protein eL32
IPR020052
Domain description: Large ribosomal subunit protein eL31, conserved site
Occurring in:
  1. Large ribosomal subunit protein eL31A
IPR039109
Domain description: Large ribosomal subunit protein eL30-like
Occurring in:
  1. Large ribosomal subunit protein eL30
IPR001196
Domain description: Large ribosomal subunit protein uL15, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL15
IPR030878
Domain description: Large ribosomal subunit protein uL15
Occurring in:
  1. Large ribosomal subunit protein uL15
IPR018262
Domain description: Large ribosomal subunit protein eL27, conserved site
Occurring in:
  1. Large ribosomal subunit protein eL27A
IPR041991
Domain description: Large ribosomal subunit protein eL27, KOW domain
Occurring in:
  1. Large ribosomal subunit protein eL27A
IPR038655
Domain description: Large ribosomal subunit protein eL27 superfamily
Occurring in:
  1. Large ribosomal subunit protein eL27A
IPR041988
Domain description: Large ribosomal subunit protein uL24, KOW domain
Occurring in:
  1. Large ribosomal subunit protein uL24A
IPR005825
Domain description: Large ribosomal subunit protein uL24, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL24A
IPR005824
Domain description: KOW
Occurring in:
  1. Large ribosomal subunit protein uL24A
IPR001014
Domain description: Large ribosomal subunit protein uL23, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL23
IPR012677
Domain description: Nucleotide-binding alpha-beta plait domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL23
IPR005633
Domain description: Large ribosomal subunit protein uL23, N-terminal
Occurring in:
  1. Large ribosomal subunit protein uL23
IPR023442
Domain description: Large ribosomal subunit protein eL24, conserved site
Occurring in:
  1. Large ribosomal subunit protein eL24A
IPR038630
Domain description: Ribosomal protein L24e/L24 superfamily
Occurring in:
  1. Large ribosomal subunit protein eL24A
IPR019972
Domain description: Large ribosomal subunit protein uL14, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL14A
IPR038526
Domain description: Large ribosomal subunit protein eL22 superfamily
Occurring in:
  1. Large ribosomal subunit protein eL22A
IPR018259
Domain description: Large ribosomal subunit protein eL21, conserved site
Occurring in:
  1. Large ribosomal subunit protein eL21A
IPR036948
Domain description: Large ribosomal subunit protein eL21 superfamily
Occurring in:
  1. Large ribosomal subunit protein eL21A
IPR023573
Domain description: Large ribosomal subunit protein eL20 domain
Occurring in:
  1. Large ribosomal subunit protein eL20A
IPR028877
Domain description: Large ribosomal subunit protein eL20
Occurring in:
  1. Large ribosomal subunit protein eL20A
IPR023638
Domain description: Large ribosomal subunit protein eL19, conserved site
Occurring in:
  1. Large ribosomal subunit protein eL19A
IPR033935
Domain description: Large ribosomal subunit protein eL19, eukaryotic
Occurring in:
  1. Large ribosomal subunit protein eL19A
IPR035970
Domain description: Large ribosomal subunit protein eL19 superfamily
Occurring in:
  1. Large ribosomal subunit protein eL19A
IPR039547
Domain description: Large ribosomal subunit protein eL19
Occurring in:
  1. Large ribosomal subunit protein eL19A
IPR015972
Domain description: Large ribosomal subunit protein eL19, domain 1
Occurring in:
  1. Large ribosomal subunit protein eL19A
IPR021132
Domain description: Large ribosomal subunit protein eL18, conserved site
Occurring in:
  1. Large ribosomal subunit protein eL18A
IPR000039
Domain description: Large ribosomal subunit protein eL18
Occurring in:
  1. Large ribosomal subunit protein eL18A
IPR018260
Domain description: Large ribosomal subunit protein uL22, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL22A
IPR023563
Domain description: Large ribosomal subunit protein uL13, conserved site
Occurring in:
  1. Large ribosomal subunit protein uL13A
IPR005755
Domain description: Large ribosomal subunit protein uL13, eukaryotic/archaeal
Occurring in:
  1. Large ribosomal subunit protein uL13A
IPR020925
Domain description: Large ribosomal subunit protein eL15, conserved site
Occurring in:
  1. Large ribosomal subunit protein eL15A
IPR024794
Domain description: Large ribosomal subunit protein eL15 core domain superfamily
Occurring in:
  1. Large ribosomal subunit protein eL15A
IPR040637
Domain description: Large ribosomal subunit protein uL10-like, insertion domain
Occurring in:
  1. Large ribosomal subunit protein uL10
IPR043164
Domain description: Large ribosomal subunit protein uL10-like, insertion domain superfamily
Occurring in:
  1. Large ribosomal subunit protein uL10
IPR001790
Domain description: Large ribosomal subunit protein uL10
Occurring in:
  1. Large ribosomal subunit protein uL10
IPR030670
Domain description: Large ribosomal subunit protein uL10, eukaryotes
Occurring in:
  1. Large ribosomal subunit protein uL10

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