› 8atd

Electron Microscopy
3.1Å resolution

Wild type hexamer oxalyl-CoA synthetase (OCS)

Released:
DOI: 10.2210/pdb8atd/pdb
PDB entry 8atd coloured by chain, front view.
PDB entry 8atd coloured by chain, side view.
PDB entry 8atd coloured by chain, top view.
Source organism: Saccharomyces cerevisiae
Primary publication:
Asymmetric horseshoe-like assembly of peroxisomal yeast oxalyl-CoA synthetase.
Bürgi J, Lill P, Giannopoulou EA, Jeffries CM, Chojnowski G, Raunser S, Gatsogiannis C, Wilmanns M
Biol Chem (2023)
PMID: 36694962
Related structures: EMD-15646

Function and Biology Details

Reaction catalysed: 
ATP + oxalate + CoA = AMP + diphosphate + oxalyl-CoA
Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo hexamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-153556 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Oxalate--CoA ligase Chains: A, B, C, D, E, F
Molecule details ›
Chains: A, B, C, D, E, F
Length: 431 amino acids
Theoretical weight: 48.14 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Escherichia coli
UniProt:
  • Canonical: P38137 (Residues: 6-436; Coverage: 79%)
Gene names: AAE3, FAT2, PCS60, YBR1512, YBR222C
Sequence domains: AMP-binding enzyme

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.1Å
Relevant EMDB volumes: EMD-15646
Expression system: Escherichia coli

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