8b0f

Electron Microscopy
3Å resolution

CryoEM structure of C5b8-CD59

Released:
Source organisms:
Related structures: EMD-15779

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero heptamer (preferred)
PDBe Complex ID:
PDB-CPX-133868 (preferred)
Entry contents:
7 distinct polypeptide molecules
Macromolecules (9 distinct):
Complement component C6 Chain: B
Molecule details ›
Chain: B
Length: 934 amino acids
Theoretical weight: 104.92 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P13671 (Residues: 1-934; Coverage: 100%)
Gene name: C6
Sequence domains:
Complement component C7 Chain: C
Complement component C8 beta chain Chain: D
Molecule details ›
Chain: D
Length: 591 amino acids
Theoretical weight: 67.14 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P07358 (Residues: 1-591; Coverage: 100%)
Gene name: C8B
Sequence domains:
Complement component C8 alpha chain Chain: E
Molecule details ›
Chain: E
Length: 584 amino acids
Theoretical weight: 65.24 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P07357 (Residues: 1-584; Coverage: 100%)
Gene name: C8A
Sequence domains:
Complement component C8 gamma chain Chain: F
Molecule details ›
Chain: F
Length: 202 amino acids
Theoretical weight: 22.3 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P07360 (Residues: 1-202; Coverage: 100%)
Gene name: C8G
Sequence domains: Lipocalin / cytosolic fatty-acid binding protein family
CD59 glycoprotein Chain: G
Molecule details ›
Chain: G
Length: 120 amino acids
Theoretical weight: 13.36 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: P13987 (Residues: 1-120; Coverage: 92%)
Gene names: CD59, MIC11, MIN1, MIN2, MIN3, MSK21
Sequence domains: u-PAR/Ly-6 domain

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG
Carbohydrate polymer : NEW Components: NAG, BMA
2 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution:
Relevant EMDB volumes: EMD-15779
Expression system: Escherichia coli