8cep

Electron Microscopy
2.04Å resolution

Kasugamycin bound to the 30S body

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero nonadecamer (preferred)
PDBe Complex ID:
PDB-CPX-272119 (preferred)
Entry contents:
13 distinct polypeptide molecules
2 distinct RNA molecules
Macromolecules (15 distinct):
Small ribosomal subunit protein uS4 Chain: D
Molecule details ›
Chain: D
Length: 206 amino acids
Theoretical weight: 23.51 KDa
Source organism: Escherichia coli BW25113
UniProt:
  • Canonical: P0A7V8 (Residues: 1-206; Coverage: 100%)
Gene names: JW3258, b3296, ramA, rpsD
Sequence domains:
Small ribosomal subunit protein uS5 Chain: E
Molecule details ›
Chain: E
Length: 167 amino acids
Theoretical weight: 17.63 KDa
Source organism: Escherichia coli BW25113
UniProt:
  • Canonical: P0A7W1 (Residues: 1-167; Coverage: 100%)
Gene names: JW3265, b3303, rpsE, spc
Sequence domains:
Small ribosomal subunit protein bS6 Chain: F
Small ribosomal subunit protein uS8 Chain: H
Small ribosomal subunit protein uS11 Chain: K
Small ribosomal subunit protein uS12 Chain: L
Small ribosomal subunit protein uS15 Chain: O
Small ribosomal subunit protein bS16 Chain: P
Small ribosomal subunit protein uS17 Chain: Q
Small ribosomal subunit protein bS18 Chain: R
Small ribosomal subunit protein bS20 Chain: T
Small ribosomal subunit protein bS21 Chain: U
Capreomycin IA Chains: B, C, G, I, V
16S ribosomal RNA Chain: A
23S ribosomal RNA Chain: a

Ligands and Environments

Experiments and Validation Details

Entry percentile scores
Resolution: 2.04Å
Relevant EMDB volumes: EMD-16612
Expression system: Not provided