› 8cnl

X-ray diffraction
2.8Å resolution

Lymphocytic choriomeningitis virus 3'-5' exonuclease domain of nucleoprotein

Released:
DOI: 10.2210/pdb8cnl/pdb
PDB entry 8cnl coloured by chain, front view.
PDB entry 8cnl coloured by chain, side view.
PDB entry 8cnl coloured by chain, top view.
Source organism: Arenavirus
Entry authors: Spiliopoulou M, Papageorgiou N, Ferron F

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo octamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-531392 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Nucleoprotein Chains: A, B, C, D, E, F, G, H
Molecule details ›
Chains: A, B, C, D, E, F, G, H
Length: 218 amino acids
Theoretical weight: 24.52 KDa
Source organism: Arenavirus
Expression system: Escherichia phage T7
UniProt:
  • Canonical: P09992 (Residues: 341-558; Coverage: 39%)
Gene names: N, Segment S
Sequence domains: Arenavirus nucleocapsid C-terminal domain

Ligands and Environments

1 bound ligand:
Ligand ZN 8 x ZN
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1)
Spacegroup: P21
Unit cell:
a: 95.076Å b: 95.066Å c: 129.13Å
α: 90° β: 97.54° γ: 90°
R-values:
R R work R free
0.274 0.273 0.28
Expression system: Escherichia phage T7

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