8d9l

Electron Microscopy
4.04Å resolution

CryoEM structure of human METTL1-WDR4 in complex with Lys-tRNA and SAM

Released:
Source organism: Homo sapiens
Related structures: EMD-27265

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero trimer (preferred)
PDBe Complex ID:
PDB-CPX-250281 (preferred)
Entry contents:
2 distinct polypeptide molecules
1 distinct RNA molecule
Macromolecules (3 distinct):
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 Chain: B
Molecule details ›
Chain: B
Length: 405 amino acids
Theoretical weight: 45.12 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P57081 (Residues: 1-389; Coverage: 94%)
Gene name: WDR4
Sequence domains: WD domain, G-beta repeat
tRNA (guanine-N(7)-)-methyltransferase Chain: A
Molecule details ›
Chain: A
Length: 276 amino acids
Theoretical weight: 31.47 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q9UBP6 (Residues: 1-276; Coverage: 100%)
Gene names: C12orf1, METTL1
Sequence domains: Putative methyltransferase
Lys-tRNA Chain: C
Molecule details ›
Chain: C
Length: 73 nucleotides
Theoretical weight: 23.51 KDa
Sequence domains: tRNA

Ligands and Environments


Cofactor: Ligand SAM 1 x SAM
No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 4.04Å
Relevant EMDB volumes: EMD-27265
Expression system: Escherichia coli