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HEME O

HEO model coordinates provided in the wwPDB chemical component dictionary
HEME O in PDB entry 8f68, assembly 1, side view.
HEME O in PDB entry 8f68, assembly 1, top view.
Formula: C49 H58 Fe N4 O5
Molecular weight: 839 Da
Charge: 2

Environment details NEW

HEO 1002 bound to chain A
Ligands and residuesInteractions
 hydrophobic
negatively charged
aromatic
polar
cystein
water
positively charged
other
glycine
bound molecule
glycans (SNFG)
aromatic
clashes
covalent
electrostatic
metal hydrophobic
vdw
MET51VAL54VAL55ALA58ILE99ILE100TRP170TRP280VAL287TYR288ILE291HIS333HIS334THR352ILE355ALA356THR359ILE363PHE364PHE391GLY395GLY398VAL399LEU401ALA402ASP407HIS411LEU416HIS419PHE420VAL423ILE424VAL428CU1003

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The above 2D and 3D (Mol*) views of ligand interactions use quaternary structure derived from the PDB entry.
Please note:
  • Some chain IDs in the tooltip are followed by a number in square brackets. This number corresponds to the operation ID (mmCIF ‘oper_expression’) used to transform the chain.
  • The structure seen in Mol* (3D view) was protonated using ChimeraX.
  • Interactions were calculated using Arpeggio (see details for interaction types).
  • The colour scheme used is consistent with Clustal X.

Quick links

EBI resources (HEO)