› 8fhy

X-ray diffraction
2.53Å resolution

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-272906 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
Spike protein S1 Chains: A, D, I
Molecule details ›
Chains: A, D, I
Length: 205 amino acids
Theoretical weight: 23.07 KDa
Source organism: Severe acute respiratory syndrome coronavirus 2
Expression system: Homo sapiens
UniProt:
  • Canonical: P0DTC2 (Residues: 331-527; Coverage: 16%)
Gene names: 2, S
Sequence domains: Betacoronavirus spike glycoprotein S1, receptor binding
WRAIR-5021 Fab Light chain Chains: B, E, L
Molecule details ›
Chains: B, E, L
Length: 214 amino acids
Theoretical weight: 23.36 KDa
Source organism: Macaca mulatta
Expression system: Homo sapiens
WRAIR-5021 Fab Heavy chain Chains: C, F, H
Molecule details ›
Chains: C, F, H
Length: 220 amino acids
Theoretical weight: 23.48 KDa
Source organism: Macaca mulatta
Expression system: Homo sapiens

Ligands and Environments

3 bound ligands:
Ligand GOL 21 x GOL
Ligand NAG 3 x NAG
Ligand MLI 1 x MLI
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 24-ID-E
Spacegroup: P21
Unit cell:
a: 118.919Å b: 84.127Å c: 119.859Å
α: 90° β: 113.68° γ: 90°
R-values:
R R work R free
0.197 0.195 0.256
Expression system: Homo sapiens

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