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8fl3 › 6MZ

N6-METHYLADENOSINE-5'-MONOPHOSPHATE

Modified residue 6MZ in PDB entry 8fl3, assembly 1, front view.

Modified residue 6MZ in PDB entry 8fl3, assembly 1, side view.

Modified residue 6MZ in PDB entry 8fl3, assembly 1, top view.

Formula: C₁₁ H₁₆ N₅ O₇ P

Molecular weight: 361 Da

One-letter code: A

Charge: 0

IUPAC InChI: InChI=1S/C11H16N5O7P/c1-12-9-6-10(14-3-13-9)16(4-15-6)11-8(18)7(17)5(23-11)2-22-24(19,20)21/h3-5,7-8,11,17-18H,2H2,1H3,(H,12,13,14)(H2,19,20,21)/t5-,7-,8-,11-/m1/s1

IUPAC InChI key: WETVNPRPZIYMAC-IOSLPCCCSA-N

Molecule 5

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	Chains
	Rfam
	Ligand binding sites
	Interaction interfaces

Chains

Chain E (auth L3)

Chain E

Rfam

Residues mapped to Rfam domains

Ligand binding sites

Residues binding MAGNESIUM ION <img src="https://www.ebi.ac.uk/pdbe/static/files/pdbechem_v2/MG_200.svg" />

Residues binding GUANOSINE-5'-TRIPHOSPHATE <img src="https://www.ebi.ac.uk/pdbe/static/files/pdbechem_v2/GTP_200.svg" />

Interaction interfaces

Residues interacting with Large ribosomal subunit protein uL23 (P62750)

Residues interacting with Ribosome biogenesis protein NOP53 (Q9NZM5)

Residues interacting with Pescadillo homolog (O00541)

Residues interacting with Large ribosomal subunit protein eL8 (P62424)

Residues interacting with Large ribosomal subunit protein eL15 (P61313)

Residues interacting with Large ribosomal subunit protein uL29 (P42766)

Residues interacting with Large ribosomal subunit protein eL37 (P61927)

Residues interacting with Large ribosomal subunit protein eL13 (P26373)

Residues interacting with Large ribosomal subunit protein uL15 (P46776)

Residues interacting with Large ribosomal subunit protein eL36 (Q9Y3U8)

Residues interacting with Large ribosomal subunit protein uL24 (P61254)

Residues interacting with Large ribosomal subunit protein uL4 (P36578)

Residues interacting with Large ribosomal subunit protein eL39 (P62891)

Residues interacting with GTP-binding protein 4 (Q9BZE4)

Residues interacting with Large ribosomal subunit protein uL22 (P18621)

Residues interacting with Large ribosomal subunit protein uL13 (P40429)

Residues interacting with Large ribosomal subunit protein eL32 (P62910)

Residues interacting with Large ribosomal subunit protein eL33 (P18077)

Residues interacting with Large ribosomal subunit protein eL6 (Q02878)

Residues interacting with Large ribosomal subunit protein eL28 (P46779)

Residues interacting with Large ribosomal subunit protein uL30 (P18124)

Residues interacting with Large ribosomal subunit protein eL20 (Q02543)

Residues interacting with Large ribosomal subunit protein eL14 (P50914)

Residues interacting with Large ribosomal subunit protein uL6 (P32969)

Residues interacting with Coiled-coil domain-containing protein 86 (Q9H6F5)

Residues interacting with Large ribosomal subunit protein eL21 (P46778)

Residues interacting with Nucleolar GTP-binding protein 2 (Q13823)

Residues interacting with Large ribosomal subunit protein eL18 (Q07020)

Residues interacting with Large ribosomal subunit protein uL2 (P62917)

Residues interacting with Large ribosomal subunit protein eL34 (P49207)

Residues interacting with Large ribosomal subunit protein eL19 (P84098)

Residues interacting with Large ribosomal subunit protein eL43 (P61513)

Residues interacting with Zinc finger protein 593 (O00488)

Residues interacting with Large ribosomal subunit protein uL3 (P39023)

Residues interacting with Protein SDA1 homolog (Q9NVU7)

Residues interacting with Testis-expressed protein 10 (Q9NXF1)

Residues interacting with Ribosome biogenesis protein NSA2 homolog (O95478)

Residues interacting with Notchless protein homolog 1 (Q9NVX2)

Residues interacting with Large ribosomal subunit protein uL18 (P46777)

Residues interacting with Guanine nucleotide-binding protein-like 3 (Q9BVP2)

Residues interacting with mRNA turnover protein 4 homolog (Q9UKD2)

Residues interacting with Large ribosomal subunit protein uL11 (P30050)

Residues interacting with Large ribosomal subunit protein eL31 (P62899)

Residues interacting with Ribosomal protein uL30-like (Q6DKI1)

Residues interacting with Large ribosomal subunit protein eL38 (P63173)

Residues interacting with Large ribosomal subunit protein eL27 (P61353)

Residues interacting with Large ribosomal subunit protein eL22 (P35268)

Residues interacting with Large ribosomal subunit protein eL30 (P62888)

Residues interacting with Large ribosomal subunit protein uL14 (P62829)

Residues interacting with Probable ribosome biogenesis protein RLP24 (Q9UHA3)

Residues interacting with Proline-, glutamic acid- and leucine-rich protein 1 (Q8IZL8)

Residues interacting with Large ribosomal subunit protein uL1 (P62906)

Residues interacting with Large ribosomal subunit protein uL5 (P62913)

Residues interacting with Protein LLP homolog (Q9BRT6)

Residues interacting with Eukaryotic translation initiation factor 6 (P56537)

Sequence conservation

Amino acid probabilities The amino acid probabilities are calculated using HMM profiles based on multiple sequence alignments. Click to see more details...

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Amino acid properties

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Proline

Positive charge

Cysteine

Glycine

Variants

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Topology Data Not Available!

8fl3:L3

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PDB › 8fl3 › 6MZ

N6-METHYLADENOSINE-5'-MONOPHOSPHATE

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8fl3 › 6MZ