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8fl6 › PSU

PSEUDOURIDINE-5'-MONOPHOSPHATE

Modified residue PSU in PDB entry 8fl6, assembly 1, front view.

Modified residue PSU in PDB entry 8fl6, assembly 1, side view.

Modified residue PSU in PDB entry 8fl6, assembly 1, top view.

Formula: C₉ H₁₃ N₂ O₉ P

Molecular weight: 324 Da

One-letter code: U

Charge: 0

IUPAC InChI: InChI=1S/C9H13N2O9P/c12-5-4(2-19-21(16,17)18)20-7(6(5)13)3-1-10-9(15)11-8(3)14/h1,4-7,12-13H,2H2,(H2,16,17,18)(H2,10,11,14,15)/t4-,5-,6-,7+/m1/s1

IUPAC InChI key: MOBMOJGXNHLLIR-GBNDHIKLSA-N

Molecule 2
Molecule 4

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	Chains
	Rfam
	Ligand binding sites
	Interaction interfaces

Chains

Chain B (auth L1)

Chain B

Rfam

Residues mapped to Rfam domains

Ligand binding sites

Residues binding MAGNESIUM ION <br><span style="display:inline-block;width:100%;text-align:center;margin-top:5px;"><img src="https://www.ebi.ac.uk/pdbe/static/files/pdbechem_v2/MG_200.svg" /><span>

Interaction interfaces

Residues interacting with Large ribosomal subunit protein uL22 (P18621)

Residues interacting with Large ribosomal subunit protein uL4 (P36578)

Residues interacting with Large ribosomal subunit protein uL24 (P61254)

Residues interacting with Large ribosomal subunit protein eL13 (P26373)

Residues interacting with Large ribosomal subunit protein eL37 (P61927)

Residues interacting with Large ribosomal subunit protein uL29 (P42766)

Residues interacting with Large ribosomal subunit protein eL39 (P62891)

Residues interacting with GTP-binding protein 4 (Q9BZE4)

Residues interacting with Large ribosomal subunit protein uL23 (P62750)

Residues interacting with Pescadillo homolog (O00541)

Residues interacting with Ribosome biogenesis protein NOP53 (Q9NZM5)

Residues interacting with Large ribosomal subunit protein eL15 (P61313)

Residues interacting with Large ribosomal subunit protein eL8 (P62424)

Residues interacting with Ribosomal protein uL30-like (Q6DKI1)

Sequence conservation

Amino acid probabilities The amino acid probabilities are calculated using HMM profiles based on multiple sequence alignments. Click to see more details...

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Amino acid properties

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Negative charge

Proline

Positive charge

Cysteine

Glycine

Variants

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8fl6:

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PDB › 8fl6 › PSU

PSEUDOURIDINE-5'-MONOPHOSPHATE

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8fl6 › PSU