› 8fwd

Electron Microscopy
3.67Å resolution

Fast and versatile sequence- independent protein docking for nanomaterials design using RPXDock

Released:
DOI: 10.2210/pdb8fwd/pdb
PDB entry 8fwd coloured by chain, front view.
PDB entry 8fwd coloured by chain, side view.
PDB entry 8fwd coloured by chain, top view.
Source organism: synthetic construct
Primary publication:
Fast and versatile sequence-independent protein docking for nanomaterials design using RPXDock.
Sheffler W, Yang EC, Dowling Q, Hsia Y, Fries CN, Stanislaw J, Langowski MD, Brandys M, Li Z, Skotheim R, Borst AJ, Khmelinskaia A, King NP, Baker D
OpenAccess logo PLoS Comput Biol 19 e1010680 (2023)
PMID: 37216343
Related structures: EMD-29502

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero 48-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-215490 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
O43-rpxdoc-EK1_A Chains: 0, 2, 4, 6, 8, B, D, F, H, J, L, N, P, R, T, V, X, Z, b, d, f, h, j, l
Molecule details ›
Chains: 0, 2, 4, 6, 8, B, D, F, H, J, L, N, P, R, T, V, X, Z, b, d, f, h, j, l
Length: 242 amino acids
Theoretical weight: 26.62 KDa
Source organism: synthetic construct
Expression system: Escherichia coli
O43-rpxdoc-EK1_B Chains: 1, 3, 5, 7, 9, A, C, E, G, I, K, M, O, Q, S, U, W, Y, a, c, e, g, i, k
Molecule details ›
Chains: 1, 3, 5, 7, 9, A, C, E, G, I, K, M, O, Q, S, U, W, Y, a, c, e, g, i, k
Length: 139 amino acids
Theoretical weight: 15.27 KDa
Source organism: synthetic construct
Expression system: Escherichia coli

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.67Å
Relevant EMDB volumes: EMD-29502
Expression system: Escherichia coli

Quick links

Citations

4 citation in other articles

Blueprinting extendable nanomaterials with standardized protein blocks.
Huddy et al. (2024)
3 more

2 mentions without citation

Fast and versatile sequence-independent protein docking for nanomaterials design using RPXDock.
Sheffler et al. (2023)
1 more