› 8gbu

X-ray diffraction
2.5Å resolution

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-136616 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Capsid protein Chains: A, B, C, D, E, F
Molecule details ›
Chains: A, B, C, D, E, F
Length: 167 amino acids
Theoretical weight: 18.89 KDa
Source organism: Hepatitis B virus
Expression system: Escherichia coli
UniProt:
  • Canonical: P03147 (Residues: 1-149; Coverage: 81%)
Gene name: C
Sequence domains: Hepatitis core antigen

Ligands and Environments

2 bound ligands:
Ligand YWE 6 x YWE
Ligand EDO 8 x EDO
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: CLSI BEAMLINE 08ID-1
Spacegroup: C2
Unit cell:
a: 151.936Å b: 87.879Å c: 100.827Å
α: 90° β: 104.12° γ: 90°
R-values:
R R work R free
0.235 0.233 0.285
Expression system: Escherichia coli

Quick links

Citations

1 citations in other articles

HBCVTr: an end-to-end transformer with a deep neural network hybrid model for anti-HBV and HCV activity predictor from SMILES.
Meewan et al. (2024)