› 8gjn

Electron Microscopy
3.6Å resolution

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
hetero trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-272914 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
Heavy chain of 17B10 Fab Chain: A
Molecule details ›
Chain: A
Length: 138 amino acids
Theoretical weight: 15.35 KDa
Source organism: Mus musculus
Expression system: Homo sapiens
Light chain of 17B10 Fab Chain: B
Molecule details ›
Chain: B
Length: 127 amino acids
Theoretical weight: 14.09 KDa
Source organism: Mus musculus
Expression system: Homo sapiens
Spike protein S1 Chain: C
Molecule details ›
Chain: C
Length: 198 amino acids
Theoretical weight: 22.22 KDa
Source organism: Severe acute respiratory syndrome coronavirus 2
Expression system: Homo sapiens
UniProt:
  • Canonical: P0DTC2 (Residues: 333-530; Coverage: 16%)
Gene names: 2, S
Sequence domains: Betacoronavirus spike glycoprotein S1, receptor binding

Ligands and Environments

1 bound ligand:
Ligand NAG 1 x NAG
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.6Å
Relevant EMDB volumes: EMD-40095
Expression system: Homo sapiens

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