8gtd

Electron Microscopy
4.7Å resolution

Cryo-EM model of the marine siphophage vB_DshS-R4C portal-adaptor complex

Released:

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero 24-mer (preferred)
PDBe Complex ID:
PDB-CPX-221047 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Portal protein Chains: A, B, C, D, E, F, G, H, I, J, K, L
Molecule details ›
Chains: A, B, C, D, E, F, G, H, I, J, K, L
Length: 551 amino acids
Theoretical weight: 60.35 KDa
Source organism: Dinoroseobacter phage vB_DshS-R4C
UniProt:
  • Canonical: A0A4Y6EI29 (Residues: 1-551; Coverage: 100%)
Gene name: vBDshSR4C_005
Sequence domains: Phage portal protein, lambda family
Head-to-tail joining protein Chains: M, N, O, P, Q, R, S, T, U, V, W, X
Molecule details ›
Chains: M, N, O, P, Q, R, S, T, U, V, W, X
Length: 178 amino acids
Theoretical weight: 19.25 KDa
Source organism: Dinoroseobacter phage vB_DshS-R4C
UniProt:
  • Canonical: A0A4Y6E755 (Residues: 1-178; Coverage: 100%)
Gene name: vBDshSR4C_004

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 4.7Å
Relevant EMDB volumes: EMD-34250