› 8ipb

Electron Microscopy
3.4Å resolution

Wheat 80S ribosome pausing on AUG-Stop with cycloheximide

Released:
DOI: 10.2210/pdb8ipb/pdb
PDB entry 8ipb coloured by chain, front view.
PDB entry 8ipb coloured by chain, side view.
PDB entry 8ipb coloured by chain, top view.
Source organisms:
Primary publication:
Boric acid intercepts 80S ribosome migration from AUG-stop by stabilizing eRF1.
Tanaka M, Yokoyama T, Saito H, Nishimoto M, Tsuda K, Sotta N, Shigematsu H, Shirouzu M, Iwasaki S, Ito T, Fujiwara T
Nat Chem Biol (2024)
PMID: 38267667
Related structures: EMD-35638

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
hetero 79-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-278900 (preferred)
Entry contents:
73 distinct polypeptide molecules
6 distinct RNA molecules
Macromolecules (79 distinct):
40S ribosomal protein S24 Chain: ba
Molecule details ›
Chain: ba
Length: 137 amino acids
Theoretical weight: 15.74 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6PK86 (Residues: 1-137; Coverage: 100%)
Gene names: CFC21_088220, CFC21_088221
Sequence domains: Ribosomal protein S24e
40S ribosomal protein S8 Chain: ca
Molecule details ›
Chain: ca
Length: 225 amino acids
Theoretical weight: 25.34 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6AYT7 (Residues: 1-225; Coverage: 100%)
Gene name: CFC21_017118
Sequence domains: Ribosomal protein S8e
Plectin/eS10 N-terminal domain-containing protein Chain: da
Molecule details ›
Chain: da
Length: 188 amino acids
Theoretical weight: 20.46 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5AUH7 (Residues: 1-188; Coverage: 100%)
Gene name: CFC21_017397
Sequence domains: Plectin/S10 domain
40S ribosomal protein S23 Chain: ga
Molecule details ›
Chain: ga
Length: 142 amino acids
Theoretical weight: 15.7 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5FV77 (Residues: 1-142; Coverage: 100%)
Gene names: CFC21_036826, CFC21_036828, CFC21_037201, CFC21_042798, CFC21_048659, CFC21_068535, CFC21_080452
Sequence domains: Ribosomal protein S12/S23
RACK1 Chain: ha
Molecule details ›
Chain: ha
Length: 332 amino acids
Theoretical weight: 36.2 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5D4F5 (Residues: 1-332; Coverage: 100%)
Gene names: CFC21_040720, CFC21_047775, TRAES_3BF007900030CFD_c1
Sequence domains: WD domain, G-beta repeat
30S ribosomal protein S3, chloroplastic Chain: ia
Molecule details ›
Chain: ia
Length: 227 amino acids
Theoretical weight: 25.41 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: Q8L804 (Residues: 1-227; Coverage: 100%)
Sequence domains:
40S ribosomal protein S4 Chain: ja
Molecule details ›
Chain: ja
Length: 265 amino acids
Theoretical weight: 30.01 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A1D5SLI4 (Residues: 1-265; Coverage: 100%)
Gene names: CFC21_005863, CFC21_010690
Sequence domains:
Small ribosomal subunit protein uS7c Chain: ka
Molecule details ›
Chain: ka
Length: 200 amino acids
Theoretical weight: 22.35 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5D067 (Residues: 1-200; Coverage: 100%)
Gene names: CFC21_039914, TRAES_3BF058200010CFD_c1
Sequence domains: Ribosomal protein S7p/S5e
40S ribosomal protein S16 Chain: la
Molecule details ›
Chain: la
Length: 149 amino acids
Theoretical weight: 16.87 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6HX49 (Residues: 1-149; Coverage: 100%)
Gene name: CFC21_052703
Sequence domains: Ribosomal protein S9/S16
Small ribosomal subunit protein uS10 domain-containing protein Chain: ma
Molecule details ›
Chain: ma
Length: 127 amino acids
Theoretical weight: 14.13 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: U5HTD8 (Residues: 1-127; Coverage: 100%)
Gene names: CFC21_019225, CFC21_019228, CFC21_019231, CFC21_019235, CFC21_054980, CFC21_107037, rps20
Sequence domains: Ribosomal protein S10p/S20e
30S ribosomal protein S11, chloroplastic Chain: na
Molecule details ›
Chain: na
Length: 151 amino acids
Theoretical weight: 16.4 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6SS17 (Residues: 1-151; Coverage: 100%)
Gene name: CFC21_104703
Sequence domains: Ribosomal protein S11
Putative ribosomal protein S18 Chain: oa
Molecule details ›
Chain: oa
Length: 152 amino acids
Theoretical weight: 17.7 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: Q8L806 (Residues: 1-152; Coverage: 100%)
Gene names: CFC21_068138, CFC21_073936, CFC21_099813
Sequence domains: Ribosomal protein S13/S18
Small ribosomal subunit protein uS15 N-terminal domain-containing protein Chain: pa
Molecule details ›
Chain: pa
Length: 151 amino acids
Theoretical weight: 17.1 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: Q5XUU9 (Residues: 1-151; Coverage: 100%)
Sequence domains:
40S ribosomal protein S17 Chain: qa
Molecule details ›
Chain: qa
Length: 143 amino acids
Theoretical weight: 16.52 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B5YWZ3 (Residues: 1-143; Coverage: 100%)
Gene name: CFC21_006450
Sequence domains: Ribosomal S17
40S ribosomal protein S19 Chain: ra
Molecule details ›
Chain: ra
Length: 155 amino acids
Theoretical weight: 17.1 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5FWF5 (Residues: 1-155; Coverage: 100%)
Gene names: CFC21_065464, CFC21_076659
Sequence domains: Ribosomal protein S19e
40S ribosomal protein uS19 Chain: sa
Molecule details ›
Chain: sa
Length: 154 amino acids
Theoretical weight: 17.42 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5ASA4 (Residues: 1-154; Coverage: 100%)
Gene names: CAMPLR22A2D_LOCUS2419, CFC21_016803, CFC21_029550
Sequence domains: Ribosomal protein S19
40S ribosomal protein S25 Chain: ta
Molecule details ›
Chain: ta
Length: 108 amino acids
Theoretical weight: 12.09 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5EP45 (Residues: 1-108; Coverage: 100%)
Gene names: CFC21_009979, CFC21_056005, CFC21_056010, CFC21_056015
Sequence domains: S25 ribosomal protein
S28 ribosomal protein Chain: ua
Molecule details ›
Chain: ua
Length: 86 amino acids
Theoretical weight: 9.82 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: Q7X9K4 (Residues: 1-86; Coverage: 100%)
Sequence domains: Ribosomal protein S28e
Small ribosomal subunit protein uS8c Chain: va
Molecule details ›
Chain: va
Length: 129 amino acids
Theoretical weight: 14.92 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A077RZD1 (Residues: 1-129; Coverage: 100%)
Gene names: CFC21_034863, CFC21_040826, CFC21_046784, TRAES_3BF007400090CFD_c1
Sequence domains: Ribosomal protein S8
Small ribosomal subunit protein uS14 Chain: wa
Molecule details ›
Chain: wa
Length: 56 amino acids
Theoretical weight: 6.39 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: Q5I7K3 (Residues: 1-56; Coverage: 100%)
Gene name: RPS29
Sequence domains: Ribosomal protein S14p/S29e
40S ribosomal protein S27 Chain: xa
Molecule details ›
Chain: xa
Length: 86 amino acids
Theoretical weight: 9.58 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5HZ68 (Residues: 1-86; Coverage: 100%)
Gene names: CFC21_056773, CFC21_058757, CFC21_100173
Sequence domains: Ribosomal protein S27
40S ribosomal protein S30 Chain: ya
Molecule details ›
Chain: ya
Length: 62 amino acids
Theoretical weight: 6.93 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6S9M7 (Residues: 1-62; Coverage: 100%)
Gene name: CFC21_101292
Sequence domains: Ribosomal protein S30
Small ribosomal subunit protein uS2 Chain: za
Molecule details ›
Chain: za
Length: 308 amino acids
Theoretical weight: 33.3 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5E2W7 (Residues: 1-308; Coverage: 100%)
Gene name: CFC21_058947
Sequence domains: Ribosomal protein S2
Small ribosomal subunit protein eS1 Chain: bb
Molecule details ›
Chain: bb
Length: 263 amino acids
Theoretical weight: 30.04 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6IU74 (Residues: 1-263; Coverage: 100%)
Gene name: CFC21_058573
Sequence domains: Ribosomal S3Ae family
40S ribosomal protein S21 Chain: cb
Molecule details ›
Chain: cb
Length: 82 amino acids
Theoretical weight: 9.19 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5EL62 (Residues: 1-82; Coverage: 100%)
Gene names: CFC21_052197, CFC21_061690
Sequence domains: Ribosomal protein S21e
40S ribosomal protein S26 Chain: db
Molecule details ›
Chain: db
Length: 156 amino acids
Theoretical weight: 16.58 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6LWE1 (Residues: 1-156; Coverage: 100%)
Gene name: CFC21_074379
Sequence domains: Ribosomal protein S26e
30S ribosomal protein S4, chloroplastic Chain: eb
Molecule details ›
Chain: eb
Length: 195 amino acids
Theoretical weight: 22.53 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5FPA7 (Residues: 1-195; Coverage: 100%)
Gene names: CFC21_011030, CFC21_064815, CFC21_070616
Sequence domains:
S5 DRBM domain-containing protein Chain: fb
Molecule details ›
Chain: fb
Length: 274 amino acids
Theoretical weight: 30 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6LVN2 (Residues: 1-274; Coverage: 100%)
Gene name: CFC21_074258
Sequence domains:
40S ribosomal protein S6 Chain: gb
Molecule details ›
Chain: gb
Length: 250 amino acids
Theoretical weight: 28.49 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A2X0SLI3 (Residues: 1-250; Coverage: 100%)
Gene names: CAMPLR22A2D_LOCUS1521, CFC21_015985, CFC21_028704
Sequence domains: Ribosomal protein S6e
40S ribosomal protein S7 Chain: hb
Molecule details ›
Chain: hb
Length: 192 amino acids
Theoretical weight: 22.3 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: Q5I7K2 (Residues: 1-192; Coverage: 100%)
Gene names: CFC21_051939, CFC21_057885
Sequence domains: Ribosomal protein S7e
Small ribosomal subunit protein uS17 N-terminal domain-containing protein Chain: ib
Molecule details ›
Chain: ib
Length: 159 amino acids
Theoretical weight: 17.84 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5BFB7 (Residues: 1-159; Coverage: 100%)
Gene names: CFC21_025034, CFC21_031339
Sequence domains:
60S ribosomal protein L7a Chain: AA
Molecule details ›
Chain: AA
Length: 258 amino acids
Theoretical weight: 29.41 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6RED0 (Residues: 1-258; Coverage: 100%)
Gene name: CFC21_097640
Sequence domains: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
60S ribosomal protein L21 Chain: BA
Molecule details ›
Chain: BA
Length: 164 amino acids
Theoretical weight: 18.72 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: F4YWL9 (Residues: 1-164; Coverage: 100%)
Gene names: CFC21_068953, RPL21
Sequence domains: Ribosomal protein L21e
60S ribosomal protein L27 Chain: CA
Molecule details ›
Chain: CA
Length: 137 amino acids
Theoretical weight: 15.62 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A341XZK6 (Residues: 1-137; Coverage: 100%)
Gene name: CFC21_098384
Sequence domains:
Large ribosomal subunit protein uL2 C-terminal domain-containing protein Chain: DA
Molecule details ›
Chain: DA
Length: 261 amino acids
Theoretical weight: 28.25 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5ECL2 (Residues: 1-261; Coverage: 100%)
Gene names: CFC21_052694, CFC21_057232, CFC21_061205, CFC21_064588, CFC21_070369, CFC21_076331
Sequence domains:
60S ribosomal protein L11 Chain: EA
Molecule details ›
Chain: EA
Length: 180 amino acids
Theoretical weight: 20.73 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B5XX39 (Residues: 1-180; Coverage: 100%)
Sequence domains:
Large ribosomal subunit protein uL6 alpha-beta domain-containing protein Chain: FA
Molecule details ›
Chain: FA
Length: 189 amino acids
Theoretical weight: 21.33 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5I5G5 (Residues: 1-189; Coverage: 100%)
Gene names: CFC21_033307, CFC21_038784, CFC21_095138, TRAES_3BF060500370CFD_c1
Sequence domains: Ribosomal protein L6
Ribosomal protein L17 Chain: GA
Molecule details ›
Chain: GA
Length: 140 amino acids
Theoretical weight: 15.04 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: Q5I7K4 (Residues: 1-140; Coverage: 100%)
Gene names: CFC21_006360, CFC21_011199, CFC21_085267, CFC21_090119
Sequence domains: Ribosomal protein L14p/L23e
Ribosomal protein L15 Chain: HA
Molecule details ›
Chain: HA
Length: 204 amino acids
Theoretical weight: 24.49 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5FEX7 (Residues: 1-204; Coverage: 100%)
Gene names: CAMPLR22A2D_LOCUS2234, CFC21_029414, CFC21_065333, CFC21_077061
Sequence domains: Ribosomal L15
Large ribosomal subunit protein uL15/eL18 domain-containing protein Chain: IA
Molecule details ›
Chain: IA
Length: 145 amino acids
Theoretical weight: 16.05 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6DCS5 (Residues: 1-145; Coverage: 100%)
Gene name: CFC21_028780
Sequence domains: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
Large ribosomal subunit protein uL15/eL18 domain-containing protein Chain: JA
Molecule details ›
Chain: JA
Length: 187 amino acids
Theoretical weight: 21.29 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6ATQ1 (Residues: 1-187; Coverage: 100%)
Gene name: CFC21_015448
Sequence domains: Ribosomal protein 60S L18 and 50S L18e
Large ribosomal subunit protein uL18 C-terminal eukaryotes domain-containing protein Chain: KA
Molecule details ›
Chain: KA
Length: 301 amino acids
Theoretical weight: 34.49 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5BZZ2 (Residues: 1-301; Coverage: 100%)
Gene names: CFC21_017319, CFC21_030053
Sequence domains:
Ribosomal protein L19 Chain: LA
Molecule details ›
Chain: LA
Length: 213 amino acids
Theoretical weight: 24.69 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6DA12 (Residues: 1-213; Coverage: 100%)
Gene names: CFC21_015301, CFC21_027941
Sequence domains: Ribosomal protein L19e
60S ribosomal protein uL22 Chain: MA
Molecule details ›
Chain: MA
Length: 170 amino acids
Theoretical weight: 19.53 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5FSM8 (Residues: 1-170; Coverage: 100%)
Gene names: CFC21_071208, CFC21_077189
Sequence domains: Ribosomal protein L22p/L17e
Large ribosomal subunit protein uL23 N-terminal domain-containing protein Chain: NA
Molecule details ›
Chain: NA
Length: 152 amino acids
Theoretical weight: 16.92 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A1D5UQZ5 (Residues: 1-152; Coverage: 100%)
Gene names: CAMPLR22A2D_LOCUS3567, CFC21_010645, CFC21_024362, CFC21_030666
Sequence domains:
TRASH domain-containing protein Chain: OA
Molecule details ›
Chain: OA
Length: 162 amino acids
Theoretical weight: 18.45 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5CDW4 (Residues: 1-162; Coverage: 100%)
Gene name: CFC21_042648
Sequence domains: Ribosomal protein L24e
KOW domain-containing protein Chain: PA
Molecule details ›
Chain: PA
Length: 157 amino acids
Theoretical weight: 17.59 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6GQI2 (Residues: 1-157; Coverage: 100%)
Gene name: CFC21_046528
Sequence domains:
Large ribosomal subunit protein eL28 Chain: QA
Molecule details ›
Chain: QA
Length: 147 amino acids
Theoretical weight: 16.61 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B5ZZN9 (Residues: 1-147; Coverage: 100%)
Sequence domains: Ribosomal L28e protein family
Large ribosomal subunit protein eL30 Chain: RA
Molecule details ›
Chain: RA
Length: 112 amino acids
Theoretical weight: 12.37 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: Q5I7K9 (Residues: 1-112; Coverage: 100%)
Sequence domains: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
60S ribosomal protein L31 Chain: SA
Molecule details ›
Chain: SA
Length: 123 amino acids
Theoretical weight: 14.15 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5G990 (Residues: 1-123; Coverage: 100%)
Gene names: CFC21_084218, CFC21_093418
Sequence domains: Ribosomal protein L31e
60S ribosomal protein L32 Chain: TA
Molecule details ›
Chain: TA
Length: 133 amino acids
Theoretical weight: 15.74 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6SDD9 (Residues: 1-133; Coverage: 100%)
Gene name: CFC21_102549
Sequence domains: Ribosomal protein L32
Ribosomal protein L37 Chain: UA
Molecule details ›
Chain: UA
Length: 93 amino acids
Theoretical weight: 10.77 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A1D6BC85 (Residues: 1-93; Coverage: 100%)
Gene names: CFC21_086135, CFC21_091005, CFC21_091010
Sequence domains: Ribosomal protein L37e
Ribosomal protein L39 Chain: VA
Molecule details ›
Chain: VA
Length: 76 amino acids
Theoretical weight: 9.44 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: Q5I7K7 (Residues: 1-51; Coverage: 100%)
Gene names: CFC21_061075, CFC21_071752, CFC21_085024, CFC21_089802, CFC21_094271, CFC21_096449
Sequence domains: Ribosomal L39 protein
60S ribosomal protein eL42 Chain: WA
Molecule details ›
Chain: WA
Length: 105 amino acids
Theoretical weight: 12.14 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5HX73 (Residues: 1-105; Coverage: 100%)
Gene names: CAMPLR22A2D_LOCUS2111, CFC21_023035, CFC21_066964, CFC21_067977, CFC21_072777, CFC21_073788, CFC21_078767, CFC21_079793, CFC21_099667, CFC21_099668, CFC21_110912
Sequence domains: Ribosomal protein L44
Large ribosomal subunit protein eL14 domain-containing protein Chain: XA
Molecule details ›
Chain: XA
Length: 135 amino acids
Theoretical weight: 15.49 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6DGT8 (Residues: 1-135; Coverage: 100%)
Gene name: CFC21_030928
Sequence domains: Ribosomal protein L14
60S ribosomal protein L18a Chain: YA
Molecule details ›
Chain: YA
Length: 178 amino acids
Theoretical weight: 21.38 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5D7B8 (Residues: 1-178; Coverage: 100%)
Gene name: CFC21_041679
Sequence domains: Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A
60S ribosomal protein L22 Chain: ZA
Molecule details ›
Chain: ZA
Length: 130 amino acids
Theoretical weight: 14.5 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6C0D4 (Residues: 1-130; Coverage: 100%)
Gene name: CFC21_021810
Sequence domains: Ribosomal L22e protein family
60S ribosomal protein L36 Chain: AB
Molecule details ›
Chain: AB
Length: 112 amino acids
Theoretical weight: 12.56 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: Q5I7L5 (Residues: 1-112; Coverage: 100%)
Gene name: CFC21_064117
Sequence domains: Ribosomal protein L36e
Large ribosomal subunit protein uL29 Chain: BB
Molecule details ›
Chain: BB
Length: 124 amino acids
Theoretical weight: 14.4 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: Q8L805 (Residues: 1-124; Coverage: 100%)
Gene name: RPL35
Sequence domains: Ribosomal L29 protein
60S ribosomal protein uL30 Chain: CB
Molecule details ›
Chain: CB
Length: 244 amino acids
Theoretical weight: 28.16 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6DM38 (Residues: 1-244; Coverage: 100%)
Gene name: CFC21_075603
Sequence domains:
Ribosomal protein L3-A2 Chain: DB
Molecule details ›
Chain: DB
Length: 389 amino acids
Theoretical weight: 44.72 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: Q7X748 (Residues: 1-389; Coverage: 100%)
Gene names: CFC21_070698, RPL3, RPL3-A2, RPL3A-2
Sequence domains: Ribosomal protein L3
Large ribosomal subunit protein uL4 C-terminal domain-containing protein Chain: EB
Molecule details ›
Chain: EB
Length: 404 amino acids
Theoretical weight: 44.29 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B5ZXX7 (Residues: 1-404; Coverage: 100%)
Gene name: CFC21_012388
Sequence domains:
Ribosomal protein L13a Chain: FB
Molecule details ›
Chain: FB
Length: 206 amino acids
Theoretical weight: 23.58 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: Q5I7L1 (Residues: 1-206; Coverage: 100%)
Sequence domains: Ribosomal protein L13
60S ribosomal protein L37a, expressed Chain: GB
Molecule details ›
Chain: GB
Length: 92 amino acids
Theoretical weight: 10.27 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: D8L9P6 (Residues: 1-92; Coverage: 100%)
Gene names: CFC21_098386, CFC21_109870, TAA_ctg0616b.00240.1, TRAES_3BF073800030CFD_c1
Sequence domains: Ribosomal L37ae protein family
60S ribosomal protein uL16 Chain: HB
Molecule details ›
Chain: HB
Length: 217 amino acids
Theoretical weight: 24.52 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6HUM3 (Residues: 1-217; Coverage: 100%)
Gene name: CFC21_052842
Sequence domains: Ribosomal protein L16p/L10e
Small ribosomal subunit protein eS32 Chain: IB
Molecule details ›
Chain: IB
Length: 25 amino acids
Theoretical weight: 3.45 KDa
Source organism: Oryza sativa
UniProt:
  • Canonical: P62125 (Residues: 1-25; Coverage: 100%)
Gene names: LOC_Os03g56878, OSJNBa0091J19.8, Os03g0781500, Os03g0781501, RPL41
Sequence domains: Ribosomal protein L41
Ubiquitin-like domain-containing protein Chain: JB
Molecule details ›
Chain: JB
Length: 129 amino acids
Theoretical weight: 14.83 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A1D5XNC2 (Residues: 1-129; Coverage: 100%)
Gene names: CFC21_051579, CFC21_053842, CFC21_056000, CFC21_060038, CFC21_062406
Sequence domains:
60S ribosomal protein L13 Chain: KB
Molecule details ›
Chain: KB
Length: 208 amino acids
Theoretical weight: 24.19 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6NJZ9 (Residues: 1-208; Coverage: 100%)
Gene name: CFC21_081845
Sequence domains: Ribosomal protein L13e
60S ribosomal protein L6 Chain: LB
Molecule details ›
Chain: LB
Length: 219 amino acids
Theoretical weight: 24.58 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6QGW3 (Residues: 14-232; Coverage: 94%)
Gene name: CFC21_092553
Sequence domains: Ribosomal protein L6e
Ribosomal protein L35A Chain: MB
Molecule details ›
Chain: MB
Length: 112 amino acids
Theoretical weight: 12.7 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A0C4BK99 (Residues: 1-112; Coverage: 100%)
Gene name: CFC21_089636
Sequence domains: Ribosomal protein L35Ae
60S ribosomal protein L38 Chain: NB
Molecule details ›
Chain: NB
Length: 69 amino acids
Theoretical weight: 8.07 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A1D5W6Q2 (Residues: 1-69; Coverage: 100%)
Gene names: CFC21_043473, CFC21_044750
Sequence domains: Ribosomal L38e protein family
60S ribosomal protein L29 Chain: OB
Molecule details ›
Chain: OB
Length: 60 amino acids
Theoretical weight: 6.99 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A1D5RRD3 (Residues: 1-60; Coverage: 100%)
Gene names: CFC21_007097, CFC21_011996
Sequence domains: Ribosomal L29e protein family
60S ribosomal protein L34 Chain: PB
Molecule details ›
Chain: PB
Length: 119 amino acids
Theoretical weight: 13.8 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6RFY8 (Residues: 1-119; Coverage: 100%)
Gene name: CFC21_098055
Sequence domains: Ribosomal protein L34e
18S Ribosomal RNA Chain: aa
Molecule details ›
Chain: aa
Length: 1810 nucleotides
Theoretical weight: 583.61 KDa
Sequence domains: Eukaryotic small subunit ribosomal RNA
60S ribosomal RNA Chain: RB
Molecule details ›
Chain: RB
Length: 3386 nucleotides
Theoretical weight: 1095.66 KDa
Sequence domains: Eukaryotic large subunit ribosomal RNA
5.8S ribosomal RNA Chain: SB
Molecule details ›
Chain: SB
Length: 160 nucleotides
Theoretical weight: 51.54 KDa
Sequence domains: 5.8S ribosomal RNA
5S ribosomal RNA Chain: TB
Molecule details ›
Chain: TB
Length: 120 nucleotides
Theoretical weight: 38.72 KDa
Sequence domains: 5S ribosomal RNA
Messenger RNA Chain: al
Molecule details ›
Chain: al
Length: 7 nucleotides
Theoretical weight: 2.23 KDa
tRNAi Chain: cl
Molecule details ›
Chain: cl
Length: 75 nucleotides
Theoretical weight: 24.45 KDa
Sequence domains: tRNA

Ligands and Environments

3 bound ligands:
Ligand MG 265 x MG
Ligand ZN 4 x ZN
Ligand 3HE 1 x 3HE
8 modified residues:
Ligand 1MG 1 x 1MG
Ligand 2MG 2 x 2MG
Ligand PSU 2 x PSU
Ligand MIA 1 x MIA
Ligand G7M 1 x G7M
Ligand H2U 1 x H2U
Ligand 5MC 2 x 5MC
Ligand 1MA 1 x 1MA

Experiments and Validation Details

Entry percentile scores
Resolution: 3.4Å
Relevant EMDB volumes: EMD-35638

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