8iuj

Electron Microscopy
3.06Å resolution

Cryo-EM structure of Euglena gracilis super-complex III2+IV2, composite

Released:
Source organism: Euglena gracilis
Related structures: EMD-35723

Function and Biology Details

Reactions catalysed:
Quinol + 2 ferricytochrome c(Side 2) = quinone + 2 ferrocytochrome c(Side 2) + 2 H(+)(Side 2)
4 ferrocytochrome c + O(2) + 8 H(+)(Side 1) = 4 ferricytochrome c + 4 H(2)O(Side 2)
Biochemical function:
Cellular component:

Structure analysis Details

Assembly composition:
hetero 60-mer (preferred)
PDBe Complex ID:
PDB-CPX-240372 (preferred)
Entry contents:
30 distinct polypeptide molecules
Macromolecules (30 distinct):
MPP-beta Chains: QA, Qa
Molecule details ›
Chains: QA, Qa
Length: 479 amino acids
Theoretical weight: 53.52 KDa
Source organism: Euglena gracilis
Cytochrome b Chains: QC, Qc
Molecule details ›
Chains: QC, Qc
Length: 368 amino acids
Theoretical weight: 42.48 KDa
Source organism: Euglena gracilis
UniProt:
  • Canonical: A0A0S2YRT7 (Residues: 13-380; Coverage: 97%)
Gene name: cob
Sequence domains:
Cytochrome c1, heme protein Chains: QD, Qd
Molecule details ›
Chains: QD, Qd
Length: 243 amino acids
Theoretical weight: 27.89 KDa
Source organism: Euglena gracilis
UniProt:
  • Canonical: P20114 (Residues: 1-243; Coverage: 100%)
Sequence domains: Cytochrome C1 family
UQCRQ Chains: QH, Qh
Molecule details ›
Chains: QH, Qh
Length: 86 amino acids
Theoretical weight: 10.08 KDa
Source organism: Euglena gracilis
UQCR10 Chains: QJ, Qj
Molecule details ›
Chains: QJ, Qj
Length: 154 amino acids
Theoretical weight: 17.58 KDa
Source organism: Euglena gracilis
Ubiquinol-cytochrome-C reductase complex subunit IX, mitochondrial Chains: QK, Qk
Molecule details ›
Chains: QK, Qk
Length: 100 amino acids
Theoretical weight: 11.3 KDa
Source organism: Euglena gracilis
UniProt:
  • Canonical: P43266 (Residues: 1-100; Coverage: 100%)
COXEG1 Chains: 4A, 4a
Molecule details ›
Chains: 4A, 4a
Length: 246 amino acids
Theoretical weight: 27.28 KDa
Source organism: Euglena gracilis
COXEG3 Chains: 4C, 4c
Molecule details ›
Chains: 4C, 4c
Length: 139 amino acids
Theoretical weight: 16.39 KDa
Source organism: Euglena gracilis
COXEG5 Chains: 4E, 4e
Molecule details ›
Chains: 4E, 4e
Length: 165 amino acids
Theoretical weight: 19.46 KDa
Source organism: Euglena gracilis
COXEG8 Chains: 4H, 4h
Molecule details ›
Chains: 4H, 4h
Length: 221 amino acids
Theoretical weight: 24.5 KDa
Source organism: Euglena gracilis
COXEG10 Chains: 4J, 4j
Molecule details ›
Chains: 4J, 4j
Length: 88 amino acids
Theoretical weight: 10.04 KDa
Source organism: Euglena gracilis
COX5c Chains: 5C, 5c
Molecule details ›
Chains: 5C, 5c
Length: 208 amino acids
Theoretical weight: 23.79 KDa
Source organism: Euglena gracilis
COX6a Chains: 6A, 6a
Molecule details ›
Chains: 6A, 6a
Length: 112 amino acids
Theoretical weight: 13.08 KDa
Source organism: Euglena gracilis
COX6b-1 Chains: 6B, 6b
Molecule details ›
Chains: 6B, 6b
Length: 287 amino acids
Theoretical weight: 33 KDa
Source organism: Euglena gracilis
COX7c Chains: 7C, 7c
Molecule details ›
Chains: 7C, 7c
Length: 171 amino acids
Theoretical weight: 19.9 KDa
Source organism: Euglena gracilis
Cytochrome c oxidase subunit 1 Chains: C1, c1
Molecule details ›
Chains: C1, c1
Length: 495 amino acids
Theoretical weight: 55.76 KDa
Source organism: Euglena gracilis
UniProt:
  • Canonical: Q34463 (Residues: 1-495; Coverage: 100%)
Gene names: CoI, cox1
Sequence domains: Cytochrome C and Quinol oxidase polypeptide I
Cytochrome c oxidase subunit 2 Chains: C2, c2
Molecule details ›
Chains: C2, c2
Length: 196 amino acids
Theoretical weight: 22.44 KDa
Source organism: Euglena gracilis
UniProt:
  • Canonical: Q9XN19 (Residues: 1-196; Coverage: 100%)
Gene name: COXII
Sequence domains:
Putative NADH dehydrogenase subunit 6 Chains: C3, c3
Molecule details ›
Chains: C3, c3
Length: 161 amino acids
Theoretical weight: 19.41 KDa
Source organism: Euglena gracilis
UniProt:
  • Canonical: Q9XN18 (Residues: 1-161; Coverage: 100%)
Gene name: ND6
COX4 Chains: DC, dc
Molecule details ›
Chains: DC, dc
Length: 179 amino acids
Theoretical weight: 20.43 KDa
Source organism: Euglena gracilis
UQCRFS1 Chains: QE, Qe
Molecule details ›
Chains: QE, Qe
Length: 252 amino acids
Theoretical weight: 27.83 KDa
Source organism: Euglena gracilis
UQCRH Chains: QF, Qf
Molecule details ›
Chains: QF, Qf
Length: 72 amino acids
Theoretical weight: 8.21 KDa
Source organism: Euglena gracilis
UQCRB Chains: QG, Qg
Molecule details ›
Chains: QG, Qg
Length: 228 amino acids
Theoretical weight: 27.4 KDa
Source organism: Euglena gracilis
UQCR9 Chains: QI, Qi
Molecule details ›
Chains: QI, Qi
Length: 70 amino acids
Theoretical weight: 6.94 KDa
Source organism: Euglena gracilis
Ubiquinol-cytochrome-c reductase complex core protein 2, mitochondrial Chains: QB, Qb
Molecule details ›
Chains: QB, Qb
Length: 474 amino acids
Theoretical weight: 51.13 KDa
Source organism: Euglena gracilis
UniProt:
  • Canonical: P43265 (Residues: 1-474; Coverage: 100%)
Sequence domains: Insulinase (Peptidase family M16)
COX5b-2 Chains: 5B, 5b
Molecule details ›
Chains: 5B, 5b
Length: 174 amino acids
Theoretical weight: 19.74 KDa
Source organism: Euglena gracilis
COXEG4 Chains: 4D, 4d
Molecule details ›
Chains: 4D, 4d
Length: 174 amino acids
Theoretical weight: 19.36 KDa
Source organism: Euglena gracilis
COXEG6 Chains: 4F, 4f
Molecule details ›
Chains: 4F, 4f
Length: 75 amino acids
Theoretical weight: 8.73 KDa
Source organism: Euglena gracilis
COXEG7 Chains: 4G, 4g
Molecule details ›
Chains: 4G, 4g
Length: 315 amino acids
Theoretical weight: 35.65 KDa
Source organism: Euglena gracilis
COXEG9 Chains: 4I, 4i
Molecule details ›
Chains: 4I, 4i
Length: 274 amino acids
Theoretical weight: 31.75 KDa
Source organism: Euglena gracilis
COX7a Chains: 7A, 7a
Molecule details ›
Chains: 7A, 7a
Length: 178 amino acids
Theoretical weight: 20.08 KDa
Source organism: Euglena gracilis

Ligands and Environments

Experiments and Validation Details

Entry percentile scores
Resolution: 3.06Å
Relevant EMDB volumes: EMD-35723