8jtk

X-ray diffraction
1.57Å resolution

Structure of AYWB phytoplasma SAP05 recognizing AtRpn10

Released:

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-220528 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
26S proteasome non-ATPase regulatory subunit 4 homolog Chain: B
Molecule details ›
Chain: B
Length: 194 amino acids
Theoretical weight: 20.88 KDa
Source organism: Arabidopsis thaliana
Expression system: Escherichia coli
UniProt:
  • Canonical: P55034 (Residues: 2-193; Coverage: 50%)
Gene names: At4g38630, F20M13.190, MBP1, MCB1, RPN10, T9A14.7
Sequence domains: von Willebrand factor type A domain
Sequence-variable mosaic (SVM) signal sequence domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 105 amino acids
Theoretical weight: 12.31 KDa
Source organism: Aster yellows witches'-broom phytoplasma AYWB
Expression system: Escherichia coli
UniProt:
  • Canonical: Q2NK94 (Residues: 33-135; Coverage: 100%)
Gene name: AYWB_032

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRF BEAMLINE BL10U2
Spacegroup: P3221
Unit cell:
a: 49.24Å b: 49.24Å c: 215.154Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.188 0.187 0.215
Expression system: Escherichia coli