Cryo-EM structure of 30S ribosome with cleaved AP-mRNA bound complex I
Source organism:
Escherichia coli K-12
Biochemical function:
structural constituent of ribosome
Biological process: translation
Cellular component: ribonucleoprotein complex
Biological process: translation
Cellular component: ribonucleoprotein complex
Protein families (Pfam)![The deposited structure of PDB entry 8k3o contains 1 copy of Pfam domain PF01165 (Ribosomal protein S21) in Small ribosomal subunit protein bS21. Showing 1 copy in chain T [auth X].](https://www.ebi.ac.uk/pdbe/static/entry/8k3o_20_X_Pfam_PF01165_image-200x200.png "The deposited structure of PDB entry <span class='highlight'>8k3o</span> contains 1 copy of Pfam domain <span class='highlight'>PF01165 (Ribosomal protein S21)</span> in <span class='highlight'>Small ribosomal subunit protein bS21</span>. Showing 1 copy in chain <span class='highlight'>T [auth X]</span>.")
![The deposited structure of PDB entry 8k3o contains 1 copy of Pfam domain PF01649 (Ribosomal protein S20) in Small ribosomal subunit protein bS20. Showing 1 copy in chain R [auth T].](https://www.ebi.ac.uk/pdbe/static/entry/8k3o_18_T_Pfam_PF01649_image-200x200.png "The deposited structure of PDB entry <span class='highlight'>8k3o</span> contains 1 copy of Pfam domain <span class='highlight'>PF01649 (Ribosomal protein S20)</span> in <span class='highlight'>Small ribosomal subunit protein bS20</span>. Showing 1 copy in chain <span class='highlight'>R [auth T]</span>.")
![The deposited structure of PDB entry 8k3o contains 1 copy of Pfam domain PF00203 (Ribosomal protein S19) in Small ribosomal subunit protein uS19. Showing 1 copy in chain Q [auth S].](https://www.ebi.ac.uk/pdbe/static/entry/8k3o_17_S_Pfam_PF00203_image-200x200.png "The deposited structure of PDB entry <span class='highlight'>8k3o</span> contains 1 copy of Pfam domain <span class='highlight'>PF00203 (Ribosomal protein S19)</span> in <span class='highlight'>Small ribosomal subunit protein uS19</span>. Showing 1 copy in chain <span class='highlight'>Q [auth S]</span>.")
![The deposited structure of PDB entry 8k3o contains 1 copy of Pfam domain PF01084 (Ribosomal protein S18) in Small ribosomal subunit protein bS18. Showing 1 copy in chain P [auth R].](https://www.ebi.ac.uk/pdbe/static/entry/8k3o_16_R_Pfam_PF01084_image-200x200.png "The deposited structure of PDB entry <span class='highlight'>8k3o</span> contains 1 copy of Pfam domain <span class='highlight'>PF01084 (Ribosomal protein S18)</span> in <span class='highlight'>Small ribosomal subunit protein bS18</span>. Showing 1 copy in chain <span class='highlight'>P [auth R]</span>.")
![The deposited structure of PDB entry 8k3o contains 1 copy of Pfam domain PF00366 (Ribosomal protein S17) in Small ribosomal subunit protein uS17. Showing 1 copy in chain O [auth Q].](https://www.ebi.ac.uk/pdbe/static/entry/8k3o_15_Q_Pfam_PF00366_image-200x200.png "The deposited structure of PDB entry <span class='highlight'>8k3o</span> contains 1 copy of Pfam domain <span class='highlight'>PF00366 (Ribosomal protein S17)</span> in <span class='highlight'>Small ribosomal subunit protein uS17</span>. Showing 1 copy in chain <span class='highlight'>O [auth Q]</span>.")
![The deposited structure of PDB entry 8k3o contains 1 copy of Pfam domain PF00886 (Ribosomal protein S16) in Small ribosomal subunit protein bS16. Showing 1 copy in chain N [auth P].](https://www.ebi.ac.uk/pdbe/static/entry/8k3o_14_P_Pfam_PF00886_image-200x200.png "The deposited structure of PDB entry <span class='highlight'>8k3o</span> contains 1 copy of Pfam domain <span class='highlight'>PF00886 (Ribosomal protein S16)</span> in <span class='highlight'>Small ribosomal subunit protein bS16</span>. Showing 1 copy in chain <span class='highlight'>N [auth P]</span>.")
![The deposited structure of PDB entry 8k3o contains 1 copy of Pfam domain PF00312 (Ribosomal protein S15) in Small ribosomal subunit protein uS15. Showing 1 copy in chain M [auth O].](https://www.ebi.ac.uk/pdbe/static/entry/8k3o_13_O_Pfam_PF00312_image-200x200.png "The deposited structure of PDB entry <span class='highlight'>8k3o</span> contains 1 copy of Pfam domain <span class='highlight'>PF00312 (Ribosomal protein S15)</span> in <span class='highlight'>Small ribosomal subunit protein uS15</span>. Showing 1 copy in chain <span class='highlight'>M [auth O]</span>.")
![The deposited structure of PDB entry 8k3o contains 1 copy of Pfam domain PF00253 (Ribosomal protein S14p/S29e) in Small ribosomal subunit protein uS14. Showing 1 copy in chain V [auth N].](https://www.ebi.ac.uk/pdbe/static/entry/8k3o_22_N_Pfam_PF00253_image-200x200.png "The deposited structure of PDB entry <span class='highlight'>8k3o</span> contains 1 copy of Pfam domain <span class='highlight'>PF00253 (Ribosomal protein S14p/S29e)</span> in <span class='highlight'>Small ribosomal subunit protein uS14</span>. Showing 1 copy in chain <span class='highlight'>V [auth N]</span>.")
![The deposited structure of PDB entry 8k3o contains 1 copy of Pfam domain PF00416 (Ribosomal protein S13/S18) in Small ribosomal subunit protein uS13. Showing 1 copy in chain L [auth M].](https://www.ebi.ac.uk/pdbe/static/entry/8k3o_12_M_Pfam_PF00416_image-200x200.png "The deposited structure of PDB entry <span class='highlight'>8k3o</span> contains 1 copy of Pfam domain <span class='highlight'>PF00416 (Ribosomal protein S13/S18)</span> in <span class='highlight'>Small ribosomal subunit protein uS13</span>. Showing 1 copy in chain <span class='highlight'>L [auth M]</span>.")
![The deposited structure of PDB entry 8k3o contains 1 copy of Pfam domain PF00164 (Ribosomal protein S12/S23) in Small ribosomal subunit protein uS12. Showing 1 copy in chain K [auth L].](https://www.ebi.ac.uk/pdbe/static/entry/8k3o_11_L_Pfam_PF00164_image-200x200.png "The deposited structure of PDB entry <span class='highlight'>8k3o</span> contains 1 copy of Pfam domain <span class='highlight'>PF00164 (Ribosomal protein S12/S23)</span> in <span class='highlight'>Small ribosomal subunit protein uS12</span>. Showing 1 copy in chain <span class='highlight'>K [auth L]</span>.")
![The deposited structure of PDB entry 8k3o contains 1 copy of Pfam domain PF00411 (Ribosomal protein S11) in Small ribosomal subunit protein uS11. Showing 1 copy in chain J [auth K].](https://www.ebi.ac.uk/pdbe/static/entry/8k3o_10_K_Pfam_PF00411_image-200x200.png "The deposited structure of PDB entry <span class='highlight'>8k3o</span> contains 1 copy of Pfam domain <span class='highlight'>PF00411 (Ribosomal protein S11)</span> in <span class='highlight'>Small ribosomal subunit protein uS11</span>. Showing 1 copy in chain <span class='highlight'>J [auth K]</span>.")
![The deposited structure of PDB entry 8k3o contains 1 copy of Pfam domain PF00338 (Ribosomal protein S10p/S20e) in Small ribosomal subunit protein uS10. Showing 1 copy in chain I [auth J].](https://www.ebi.ac.uk/pdbe/static/entry/8k3o_9_J_Pfam_PF00338_image-200x200.png "The deposited structure of PDB entry <span class='highlight'>8k3o</span> contains 1 copy of Pfam domain <span class='highlight'>PF00338 (Ribosomal protein S10p/S20e)</span> in <span class='highlight'>Small ribosomal subunit protein uS10</span>. Showing 1 copy in chain <span class='highlight'>I [auth J]</span>.")
![The deposited structure of PDB entry 8k3o contains 1 copy of Pfam domain PF00380 (Ribosomal protein S9/S16) in Small ribosomal subunit protein uS9. Showing 1 copy in chain H [auth I].](https://www.ebi.ac.uk/pdbe/static/entry/8k3o_8_I_Pfam_PF00380_image-200x200.png "The deposited structure of PDB entry <span class='highlight'>8k3o</span> contains 1 copy of Pfam domain <span class='highlight'>PF00380 (Ribosomal protein S9/S16)</span> in <span class='highlight'>Small ribosomal subunit protein uS9</span>. Showing 1 copy in chain <span class='highlight'>H [auth I]</span>.")
![The deposited structure of PDB entry 8k3o contains 1 copy of Pfam domain PF00410 (Ribosomal protein S8) in Small ribosomal subunit protein uS8. Showing 1 copy in chain G [auth H].](https://www.ebi.ac.uk/pdbe/static/entry/8k3o_7_H_Pfam_PF00410_image-200x200.png "The deposited structure of PDB entry <span class='highlight'>8k3o</span> contains 1 copy of Pfam domain <span class='highlight'>PF00410 (Ribosomal protein S8)</span> in <span class='highlight'>Small ribosomal subunit protein uS8</span>. Showing 1 copy in chain <span class='highlight'>G [auth H]</span>.")
![The deposited structure of PDB entry 8k3o contains 1 copy of Pfam domain PF00177 (Ribosomal protein S7p/S5e) in Small ribosomal subunit protein uS7. Showing 1 copy in chain F [auth G].](https://www.ebi.ac.uk/pdbe/static/entry/8k3o_6_G_Pfam_PF00177_image-200x200.png "The deposited structure of PDB entry <span class='highlight'>8k3o</span> contains 1 copy of Pfam domain <span class='highlight'>PF00177 (Ribosomal protein S7p/S5e)</span> in <span class='highlight'>Small ribosomal subunit protein uS7</span>. Showing 1 copy in chain <span class='highlight'>F [auth G]</span>.")
![The deposited structure of PDB entry 8k3o contains 1 copy of Pfam domain PF01250 (Ribosomal protein S6) in Small ribosomal subunit protein bS6. Showing 1 copy in chain E [auth F].](https://www.ebi.ac.uk/pdbe/static/entry/8k3o_5_F_Pfam_PF01250_image-200x200.png "The deposited structure of PDB entry <span class='highlight'>8k3o</span> contains 1 copy of Pfam domain <span class='highlight'>PF01250 (Ribosomal protein S6)</span> in <span class='highlight'>Small ribosomal subunit protein bS6</span>. Showing 1 copy in chain <span class='highlight'>E [auth F]</span>.")
![The deposited structure of PDB entry 8k3o contains 1 copy of Pfam domain PF03719 (Ribosomal protein S5, C-terminal domain) in Small ribosomal subunit protein uS5. Showing 1 copy in chain D [auth E].](https://www.ebi.ac.uk/pdbe/static/entry/8k3o_4_E_Pfam_PF03719_image-200x200.png "The deposited structure of PDB entry <span class='highlight'>8k3o</span> contains 1 copy of Pfam domain <span class='highlight'>PF03719 (Ribosomal protein S5, C-terminal domain)</span> in <span class='highlight'>Small ribosomal subunit protein uS5</span>. Showing 1 copy in chain <span class='highlight'>D [auth E]</span>.")
![The deposited structure of PDB entry 8k3o contains 1 copy of Pfam domain PF00333 (Ribosomal protein S5, N-terminal domain) in Small ribosomal subunit protein uS5. Showing 1 copy in chain D [auth E].](https://www.ebi.ac.uk/pdbe/static/entry/8k3o_4_E_Pfam_PF00333_image-200x200.png "The deposited structure of PDB entry <span class='highlight'>8k3o</span> contains 1 copy of Pfam domain <span class='highlight'>PF00333 (Ribosomal protein S5, N-terminal domain)</span> in <span class='highlight'>Small ribosomal subunit protein uS5</span>. Showing 1 copy in chain <span class='highlight'>D [auth E]</span>.")
![The deposited structure of PDB entry 8k3o contains 1 copy of Pfam domain PF01479 (S4 domain) in Small ribosomal subunit protein uS4. Showing 1 copy in chain C [auth D].](https://www.ebi.ac.uk/pdbe/static/entry/8k3o_3_D_Pfam_PF01479_image-200x200.png "The deposited structure of PDB entry <span class='highlight'>8k3o</span> contains 1 copy of Pfam domain <span class='highlight'>PF01479 (S4 domain)</span> in <span class='highlight'>Small ribosomal subunit protein uS4</span>. Showing 1 copy in chain <span class='highlight'>C [auth D]</span>.")
![The deposited structure of PDB entry 8k3o contains 1 copy of Pfam domain PF00163 (Ribosomal protein S4/S9 N-terminal domain) in Small ribosomal subunit protein uS4. Showing 1 copy in chain C [auth D].](https://www.ebi.ac.uk/pdbe/static/entry/8k3o_3_D_Pfam_PF00163_image-200x200.png "The deposited structure of PDB entry <span class='highlight'>8k3o</span> contains 1 copy of Pfam domain <span class='highlight'>PF00163 (Ribosomal protein S4/S9 N-terminal domain)</span> in <span class='highlight'>Small ribosomal subunit protein uS4</span>. Showing 1 copy in chain <span class='highlight'>C [auth D]</span>.")
![The deposited structure of PDB entry 8k3o contains 1 copy of Pfam domain PF00189 (Ribosomal protein S3, C-terminal domain) in Small ribosomal subunit protein uS3. Showing 1 copy in chain B [auth C].](https://www.ebi.ac.uk/pdbe/static/entry/8k3o_2_C_Pfam_PF00189_image-200x200.png "The deposited structure of PDB entry <span class='highlight'>8k3o</span> contains 1 copy of Pfam domain <span class='highlight'>PF00189 (Ribosomal protein S3, C-terminal domain)</span> in <span class='highlight'>Small ribosomal subunit protein uS3</span>. Showing 1 copy in chain <span class='highlight'>B [auth C]</span>.")
![The deposited structure of PDB entry 8k3o contains 1 copy of Pfam domain PF07650 (KH domain) in Small ribosomal subunit protein uS3. Showing 1 copy in chain B [auth C].](https://www.ebi.ac.uk/pdbe/static/entry/8k3o_2_C_Pfam_PF07650_image-200x200.png "The deposited structure of PDB entry <span class='highlight'>8k3o</span> contains 1 copy of Pfam domain <span class='highlight'>PF07650 (KH domain)</span> in <span class='highlight'>Small ribosomal subunit protein uS3</span>. Showing 1 copy in chain <span class='highlight'>B [auth C]</span>.")
![The deposited structure of PDB entry 8k3o contains 1 copy of Pfam domain PF00318 (Ribosomal protein S2) in Small ribosomal subunit protein uS2. Showing 1 copy in chain A [auth B].](https://www.ebi.ac.uk/pdbe/static/entry/8k3o_1_B_Pfam_PF00318_image-200x200.png "The deposited structure of PDB entry <span class='highlight'>8k3o</span> contains 1 copy of Pfam domain <span class='highlight'>PF00318 (Ribosomal protein S2)</span> in <span class='highlight'>Small ribosomal subunit protein uS2</span>. Showing 1 copy in chain <span class='highlight'>A [auth B]</span>.")
RNA family (Rfam)