› 8oo0

Electron Microscopy
3.1Å resolution

Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome

Released:
DOI: 10.2210/pdb8oo0/pdb
PDB entry 8oo0 coloured by chain, front view.
PDB entry 8oo0 coloured by chain, side view.
PDB entry 8oo0 coloured by chain, top view.
Source organism: Thermochaetoides thermophila
Primary publication:
Methionine aminopeptidase 2 and its autoproteolysis product have different binding sites on the ribosome.
Klein MA, Wild K, Kišonaitė M, Sinning I
OpenAccess logo Nat Commun 15 716 (2024)
PMID: 38267453
Related structures: EMD-17004

Function and Biology Details

Reactions catalysed: 
ATP + H(2)O = ADP + phosphate
Dolichyl diphosphooligosaccharide + [protein]-L-asparagine = dolichyl diphosphate + a glycoprotein with the oligosaccharide chain attached by N-beta-D-glycosyl linkage to a protein L-asparagine
Release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
hetero 85-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-279260 (preferred)
Entry contents:
80 distinct polypeptide molecules
4 distinct RNA molecules
Macromolecules (84 distinct):
Putative guanine nucleotide-binding protein Chain: A
Molecule details ›
Chain: A
Length: 316 amino acids
Theoretical weight: 35.15 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0S9U0 (Residues: 1-316; Coverage: 100%)
Gene name: CTHT_0047160
Sequence domains: WD domain, G-beta repeat
Hyaluronan/mRNA-binding protein domain-containing protein Chain: B
Molecule details ›
Chain: B
Length: 302 amino acids
Theoretical weight: 32.67 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0S428 (Residues: 1-302; Coverage: 100%)
Gene name: CTHT_0022330
Sequence domains:
Ribosome-associated molecular chaperone SSB1 Chain: C
Molecule details ›
Chain: C
Length: 614 amino acids
Theoretical weight: 67.11 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0SCU5 (Residues: 1-614; Coverage: 100%)
Gene names: CTHT_0058460, SSB1
Sequence domains: Hsp70 protein
Large ribosomal subunit protein uL2 C-terminal domain-containing protein Chain: LA
Molecule details ›
Chain: LA
Length: 254 amino acids
Theoretical weight: 27.6 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0S4P8 (Residues: 1-254; Coverage: 100%)
Gene name: CTHT_0023090
Sequence domains:
60S ribosomal protein L3-like protein Chain: LB
Molecule details ›
Chain: LB
Length: 388 amino acids
Theoretical weight: 44.07 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0RXW1 (Residues: 1-388; Coverage: 99%)
Gene name: CTHT_0004490
Sequence domains: Ribosomal protein L3
Large ribosomal subunit protein uL4 C-terminal domain-containing protein Chain: LC
Molecule details ›
Chain: LC
Length: 365 amino acids
Theoretical weight: 39.44 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0SFC3 (Residues: 1-365; Coverage: 100%)
Gene name: CTHT_0061540
Sequence domains:
Large ribosomal subunit protein uL18 Chain: LD
Molecule details ›
Chain: LD
Length: 304 amino acids
Theoretical weight: 35.03 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0SEG2 (Residues: 1-304; Coverage: 100%)
Gene name: HT_0063640
Sequence domains:
60S ribosomal protein L6 Chain: LE
Molecule details ›
Chain: LE
Length: 200 amino acids
Theoretical weight: 22.13 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0S0D6 (Residues: 1-200; Coverage: 100%)
Gene name: CTHT_0009640
Sequence domains: Ribosomal protein L6e
60S ribosomal protein l7-like protein Chain: LF
Molecule details ›
Chain: LF
Length: 249 amino acids
Theoretical weight: 28.82 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0SFL0 (Residues: 1-249; Coverage: 100%)
Gene name: CTHT_0071220
Sequence domains:
60S ribosomal protein L8 Chain: LG
Molecule details ›
Chain: LG
Length: 262 amino acids
Theoretical weight: 29.74 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0SAJ9 (Residues: 1-262; Coverage: 100%)
Gene name: CTHT_0042550
Sequence domains: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
Large ribosomal subunit protein uL6 alpha-beta domain-containing protein Chain: LH
Molecule details ›
Chain: LH
Length: 192 amino acids
Theoretical weight: 21.58 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0S0E5 (Residues: 1-229; Coverage: 84%)
Gene name: CTHT_0009740
Sequence domains: Ribosomal protein L6
60S ribosomal protein L10-like protein Chain: LI
Molecule details ›
Chain: LI
Length: 219 amino acids
Theoretical weight: 25.26 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0SEI1 (Residues: 1-219; Coverage: 100%)
Gene name: CTHT_0063830
Sequence domains: Ribosomal protein L16p/L10e
Large ribosomal subunit protein uL5 Chain: LJ
Molecule details ›
Chain: LJ
Length: 173 amino acids
Theoretical weight: 20.12 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0SHQ2 (Residues: 1-173; Coverage: 100%)
Gene name: HT_0072970
Sequence domains:
60S ribosomal protein L12-like protein Chain: LK
Molecule details ›
Chain: LK
Length: 165 amino acids
Theoretical weight: 17.8 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0SGH8 (Residues: 1-165; Coverage: 100%)
Gene name: CTHT_0066380
Sequence domains:
60S ribosomal protein L13 Chain: LL
Molecule details ›
Chain: LL
Length: 213 amino acids
Theoretical weight: 24.19 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0S992 (Residues: 1-213; Coverage: 100%)
Gene name: CTHT_0045000
Sequence domains: Ribosomal protein L13e
Large ribosomal subunit protein eL14 domain-containing protein Chain: LM
Molecule details ›
Chain: LM
Length: 142 amino acids
Theoretical weight: 16.11 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0S1R0 (Residues: 1-142; Coverage: 100%)
Gene name: CTHT_0014490
Sequence domains: Ribosomal protein L14
Ribosomal protein L15 Chain: LN
Molecule details ›
Chain: LN
Length: 203 amino acids
Theoretical weight: 24.31 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0RZ88 (Residues: 1-203; Coverage: 100%)
Gene name: CTHT_0002100
Sequence domains: Ribosomal L15
60S ribosomal protein L16-like protein Chain: LO
Molecule details ›
Chain: LO
Length: 204 amino acids
Theoretical weight: 23.04 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0SH61 (Residues: 1-204; Coverage: 100%)
Gene name: CTHT_0068840
Sequence domains: Ribosomal protein L13
60S ribosomal protein l17-like protein Chain: LP
Molecule details ›
Chain: LP
Length: 186 amino acids
Theoretical weight: 20.94 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0SGY1 (Residues: 2-187; Coverage: 100%)
Gene name: CTHT_0067970
Sequence domains: Ribosomal protein L22p/L17e
Large ribosomal subunit protein uL15/eL18 domain-containing protein Chain: LQ
Molecule details ›
Chain: LQ
Length: 213 amino acids
Theoretical weight: 24.2 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0S9B5 (Residues: 1-213; Coverage: 100%)
Gene name: CTHT_0045230
Sequence domains: Ribosomal protein 60S L18 and 50S L18e
Ribosomal protein L19 Chain: LR
Molecule details ›
Chain: LR
Length: 192 amino acids
Theoretical weight: 22.41 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0S9T3 (Residues: 2707-2898; Coverage: 7%)
Gene name: CTHT_0047080
Sequence domains: Ribosomal protein L19e
60S ribosomal protein L20 Chain: LS
Molecule details ›
Chain: LS
Length: 174 amino acids
Theoretical weight: 20.34 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0SCE2 (Residues: 1-174; Coverage: 100%)
Gene name: CTHT_0056900
Sequence domains: Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A
60S ribosomal protein l21-like protein Chain: LT
Molecule details ›
Chain: LT
Length: 160 amino acids
Theoretical weight: 18.16 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0S0Z3 (Residues: 1-160; Coverage: 100%)
Gene name: CTHT_0011760
Sequence domains: Ribosomal protein L21e
60S ribosomal protein L22-like protein Chain: LU
Molecule details ›
Chain: LU
Length: 127 amino acids
Theoretical weight: 14.3 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0SDS8 (Residues: 1-127; Coverage: 100%)
Gene name: CTHT_0052850
Sequence domains: Ribosomal L22e protein family
60S ribosomal protein l23-like protein Chain: LV
Molecule details ›
Chain: LV
Length: 139 amino acids
Theoretical weight: 14.67 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0SI44 (Residues: 1-139; Coverage: 100%)
Gene name: CTHT_0074440
Sequence domains: Ribosomal protein L14p/L23e
Large ribosomal subunit protein eL24-related N-terminal domain-containing protein Chain: LW
Molecule details ›
Chain: LW
Length: 161 amino acids
Theoretical weight: 18.08 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0S1P9 (Residues: 1-205; Coverage: 79%)
Gene name: CTHT_0014380
Sequence domains: Ribosomal protein L24e
Large ribosomal subunit protein uL23 N-terminal domain-containing protein Chain: LX
Molecule details ›
Chain: LX
Length: 156 amino acids
Theoretical weight: 17.18 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0S507 (Residues: 1-156; Coverage: 100%)
Gene name: CTHT_0023650
Sequence domains:
KOW domain-containing protein Chain: LY
Molecule details ›
Chain: LY
Length: 138 amino acids
Theoretical weight: 15.57 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0RYN9 (Residues: 1-138; Coverage: 100%)
Gene name: CTHT_0007360
Sequence domains:
60S ribosomal protein L27 Chain: LZ
Molecule details ›
Chain: LZ
Length: 135 amino acids
Theoretical weight: 15.8 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0RZE9 (Residues: 1-135; Coverage: 100%)
Gene name: CTHT_0002720
Sequence domains: Ribosomal L27e protein family
Large ribosomal subunit protein uL15/eL18 domain-containing protein Chain: La
Molecule details ›
Chain: La
Length: 149 amino acids
Theoretical weight: 16.85 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0SGT6 (Residues: 23-33, 34-164; Coverage: 87%)
Gene name: CTHT_0067510
Sequence domains: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
60S ribosomal protein L29 Chain: Lb
Molecule details ›
Chain: Lb
Length: 65 amino acids
Theoretical weight: 7.53 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: Q2H9W4 (Residues: 1-65; Coverage: 100%)
Gene name: CHGG_02990
Sequence domains: Ribosomal L29e protein family
Ribosomal protein eL8/eL30/eS12/Gadd45 domain-containing protein Chain: Lc
Molecule details ›
Chain: Lc
Length: 108 amino acids
Theoretical weight: 11.6 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0SEI0 (Residues: 1-108; Coverage: 100%)
Gene name: CTHT_0063820
Sequence domains: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
Putative 60S ribosomal protein Chain: Ld
Molecule details ›
Chain: Ld
Length: 120 amino acids
Theoretical weight: 13.87 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0SD68 (Residues: 1-120; Coverage: 100%)
Gene name: CTHT_0059140
Sequence domains: Ribosomal protein L31e
60S ribosomal protein L32-like protein Chain: Le
Molecule details ›
Chain: Le
Length: 131 amino acids
Theoretical weight: 15.1 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0S6V4 (Residues: 1-131; Coverage: 100%)
Gene name: CTHT_0027000
Sequence domains: Ribosomal protein L32
60S ribosomal protein l33-like protein Chain: Lf
Molecule details ›
Chain: Lf
Length: 109 amino acids
Theoretical weight: 12.33 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0SCL3 (Residues: 1-109; Coverage: 100%)
Gene name: CTHT_0057640
Sequence domains: Ribosomal protein L35Ae
Ribosomal protein l34-like protein Chain: Lg
Molecule details ›
Chain: Lg
Length: 119 amino acids
Theoretical weight: 13.49 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0SFN0 (Residues: 1-119; Coverage: 100%)
Gene name: CTHT_0071430
Sequence domains: Ribosomal protein L34e
dolichyl-diphosphooligosaccharide--protein glycotransferase Chain: Lh
Molecule details ›
Chain: Lh
Length: 126 amino acids
Theoretical weight: 14.64 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0S0D7 (Residues: 1-126; Coverage: 14%)
Gene name: CTHT_0009650
Sequence domains: Ribosomal L29 protein
60S ribosomal protein L36 Chain: Li
Molecule details ›
Chain: Li
Length: 110 amino acids
Theoretical weight: 12.78 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0SBN1 (Residues: 1-110; Coverage: 100%)
Gene name: CTHT_0054170
Sequence domains: Ribosomal protein L36e
Ribosomal protein L37 Chain: Lj
Molecule details ›
Chain: Lj
Length: 95 amino acids
Theoretical weight: 10.66 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0S101 (Residues: 1-95; Coverage: 100%)
Gene name: CTHT_0011850
Sequence domains: Ribosomal protein L37e
60S ribosomal protein L38-like protein Chain: Lk
Molecule details ›
Chain: Lk
Length: 80 amino acids
Theoretical weight: 9.47 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0SG89 (Residues: 1-93; Coverage: 85%)
Gene name: CTHT_0065470
Sequence domains: Ribosomal L38e protein family
Large ribosomal subunit protein eL39 Chain: Ll
Molecule details ›
Chain: Ll
Length: 51 amino acids
Theoretical weight: 6.3 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: Q2H9R2 (Residues: 1-51; Coverage: 100%)
Gene name: CHGG_03042
Sequence domains: Ribosomal L39 protein
Ubiquitin-like domain-containing protein Chain: Lm
Molecule details ›
Chain: Lm
Length: 128 amino acids
Theoretical weight: 14.61 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0S8G4 (Residues: 594-720; Coverage: 18%)
Gene name: CTHT_0029790
Sequence domains:
Small ribosomal subunit protein eS32A Chains: Ln, Lr
Molecule details ›
Chains: Ln, Lr
Length: 25 amino acids
Theoretical weight: 3.35 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: P0CX86 (Residues: 1-25; Coverage: 100%)
Gene names: D1290, RPL41A, RPL47A, YDL184C, YL41A
Sequence domains: Ribosomal protein L41
60S ribosomal protein L44-like protein Chain: Lo
Molecule details ›
Chain: Lo
Length: 106 amino acids
Theoretical weight: 12.05 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0SBZ6 (Residues: 1-106; Coverage: 100%)
Gene name: CTHT_0055350
Sequence domains: Ribosomal protein L44
60S ribosomal protein L43-like protein Chain: Lp
Molecule details ›
Chain: Lp
Length: 92 amino acids
Theoretical weight: 10.16 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0S6B0 (Residues: 1-92; Coverage: 100%)
Gene name: CTHT_0026110
Sequence domains: Ribosomal L37ae protein family
Ribosomal eL28/Mak16 domain-containing protein Chain: Lq
Molecule details ›
Chain: Lq
Length: 147 amino acids
Theoretical weight: 15.96 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0SHJ6 (Residues: 1-147; Coverage: 100%)
Gene name: CTHT_0070250
Sequence domains: Ribosomal L28e protein family
60S acidic ribosomal protein P0 Chain: Ls
Molecule details ›
Chain: Ls
Length: 312 amino acids
Theoretical weight: 33.85 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0SGP3 (Residues: 1-312; Coverage: 100%)
Gene name: CTHT_0067070
Sequence domains:
Small ribosomal subunit protein uS2 Chain: SA
Molecule details ›
Chain: SA
Length: 285 amino acids
Theoretical weight: 31.16 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0RYF9 (Residues: 1-285; Coverage: 100%)
Gene names: CTHT_0006550, RPS0
Sequence domains: Ribosomal protein S2
Small ribosomal subunit protein eS1 Chain: SB
Molecule details ›
Chain: SB
Length: 255 amino acids
Theoretical weight: 29.25 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0S7T8 (Residues: 1-255; Coverage: 100%)
Gene names: CTHT_0028780, RPS1
Sequence domains: Ribosomal S3Ae family
Small ribosomal subunit protein uS5 Chain: SC
Molecule details ›
Chain: SC
Length: 263 amino acids
Theoretical weight: 28.56 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0SAV4 (Residues: 1-263; Coverage: 100%)
Gene name: CTHT_0047910
Sequence domains:
40S ribosomal protein S3 Chain: SD
Molecule details ›
Chain: SD
Length: 254 amino acids
Theoretical weight: 27.89 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0S6I7 (Residues: 1-254; Coverage: 100%)
Gene name: CTHT_0026360
Sequence domains:
40S ribosomal protein S4 Chain: SE
Molecule details ›
Chain: SE
Length: 264 amino acids
Theoretical weight: 29.8 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0S1A6 (Residues: 1-264; Coverage: 100%)
Gene name: CTHT_0012920
Sequence domains:
Small ribosomal subunit protein uS7 domain-containing protein Chain: SF
Molecule details ›
Chain: SF
Length: 212 amino acids
Theoretical weight: 23.68 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0S1Z0 (Residues: 1-212; Coverage: 100%)
Gene name: CTHT_0015350
Sequence domains: Ribosomal protein S7p/S5e
40S ribosomal protein S6 Chain: SG
Molecule details ›
Chain: SG
Length: 239 amino acids
Theoretical weight: 27.49 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0RY43 (Residues: 1-239; Coverage: 100%)
Gene name: CTHT_0005340
Sequence domains: Ribosomal protein S6e
40S ribosomal protein S7 Chain: SH
Molecule details ›
Chain: SH
Length: 203 amino acids
Theoretical weight: 23.08 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0S8C4 (Residues: 1-203; Coverage: 100%)
Gene name: CTHT_0021240
Sequence domains: Ribosomal protein S7e
40S ribosomal protein S8 Chain: SI
Molecule details ›
Chain: SI
Length: 202 amino acids
Theoretical weight: 23.1 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0RY45 (Residues: 1-202; Coverage: 100%)
Gene name: CTHT_0005360
Sequence domains: Ribosomal protein S8e
40S ribosomal protein s9-like protein Chain: SJ
Molecule details ›
Chain: SJ
Length: 190 amino acids
Theoretical weight: 22.03 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0S0Z4 (Residues: 1-190; Coverage: 100%)
Gene name: CTHT_0011770
Sequence domains:
Plectin/eS10 N-terminal domain-containing protein Chain: SK
Molecule details ›
Chain: SK
Length: 159 amino acids
Theoretical weight: 18.12 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0RZD8 (Residues: 1-159; Coverage: 100%)
Gene name: CTHT_0002610
Sequence domains: Plectin/S10 domain
Small ribosomal subunit protein uS17 N-terminal domain-containing protein Chain: SL
Molecule details ›
Chain: SL
Length: 161 amino acids
Theoretical weight: 18.7 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0SF00 (Residues: 1-161; Coverage: 100%)
Gene name: CTHT_0060290
Sequence domains:
40S ribosomal protein S12 Chain: SM
Molecule details ›
Chain: SM
Length: 144 amino acids
Theoretical weight: 15.96 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0SHH9 (Residues: 1-144; Coverage: 100%)
Gene name: CTHT_0070080
Sequence domains: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
Small ribosomal subunit protein uS15 N-terminal domain-containing protein Chain: SN
Molecule details ›
Chain: SN
Length: 151 amino acids
Theoretical weight: 16.91 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0RZM9 (Residues: 1-151; Coverage: 100%)
Gene name: CTHT_0003530
Sequence domains:
40S ribosomal protein S14-like protein Chain: SO
Molecule details ›
Chain: SO
Length: 150 amino acids
Theoretical weight: 16.07 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0SFL1 (Residues: 1-150; Coverage: 100%)
Gene name: CTHT_0071230
Sequence domains: Ribosomal protein S11
40S ribosomal protein s15-like protein Chain: SP
Molecule details ›
Chain: SP
Length: 153 amino acids
Theoretical weight: 17.6 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0S084 (Residues: 1-153; Coverage: 100%)
Gene name: CTHT_0009120
Sequence domains: Ribosomal protein S19
40S ribosomal protein S16-like protein Chain: SQ
Molecule details ›
Chain: SQ
Length: 143 amino acids
Theoretical weight: 15.96 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0SBR7 (Residues: 1-143; Coverage: 100%)
Gene name: CTHT_0054540
Sequence domains: Ribosomal protein S9/S16
40S ribosomal protein S17-like protein Chain: SR
Molecule details ›
Chain: SR
Length: 143 amino acids
Theoretical weight: 16.72 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0S871 (Residues: 1-143; Coverage: 100%)
Gene name: CTHT_0037790
Sequence domains: Ribosomal S17
Putative ribosomal protein Chain: SS
Molecule details ›
Chain: SS
Length: 156 amino acids
Theoretical weight: 17.83 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0S6J7 (Residues: 1-156; Coverage: 100%)
Gene name: CTHT_0026460
Sequence domains: Ribosomal protein S13/S18
40S ribosomal protein S19-like protein Chain: ST
Molecule details ›
Chain: ST
Length: 153 amino acids
Theoretical weight: 17.15 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0SFK8 (Residues: 1-153; Coverage: 100%)
Gene name: CTHT_0071200
Sequence domains: Ribosomal protein S19e
Small ribosomal subunit protein uS10 domain-containing protein Chain: SU
Molecule details ›
Chain: SU
Length: 116 amino acids
Theoretical weight: 13.21 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0S379 (Residues: 1-116; Coverage: 100%)
Gene name: CTHT_0020000
Sequence domains: Ribosomal protein S10p/S20e
40S ribosomal protein S21-like protein Chain: SV
Molecule details ›
Chain: SV
Length: 98 amino acids
Theoretical weight: 10.96 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0SI21 (Residues: 1-98; Coverage: 100%)
Gene name: CTHT_0074200
Sequence domains: Ribosomal protein S21e
40S ribosomal protein S22-like protein Chain: SW
Molecule details ›
Chain: SW
Length: 130 amino acids
Theoretical weight: 14.91 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0SHI0 (Residues: 1-130; Coverage: 100%)
Gene name: CTHT_0070090
Sequence domains: Ribosomal protein S8
40S ribosomal protein s23-like protein Chain: SX
Molecule details ›
Chain: SX
Length: 145 amino acids
Theoretical weight: 15.93 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0RY17 (Residues: 1-145; Coverage: 100%)
Gene name: CTHT_0005070
Sequence domains: Ribosomal protein S12/S23
Small ribosomal subunit protein eS24 Chain: SY
Molecule details ›
Chain: SY
Length: 136 amino acids
Theoretical weight: 15.54 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: P0CU28 (Residues: 1-136; Coverage: 100%)
Gene name: CTHT_0041970.2
Sequence domains: Ribosomal protein S24e
40S ribosomal protein S25 Chain: SZ
Molecule details ›
Chain: SZ
Length: 99 amino acids
Theoretical weight: 10.93 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0S1Y9 (Residues: 1-99; Coverage: 100%)
Gene name: CTHT_0015340
Sequence domains: S25 ribosomal protein
40S ribosomal protein S26 Chain: Sa
Molecule details ›
Chain: Sa
Length: 119 amino acids
Theoretical weight: 13.62 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0S2X4 (Residues: 1-119; Coverage: 100%)
Gene name: CTHT_0018830
Sequence domains: Ribosomal protein S26e
Ribosomal protein s27-like protein Chain: Sb
Molecule details ›
Chain: Sb
Length: 82 amino acids
Theoretical weight: 8.92 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0S1S4 (Residues: 1-82; Coverage: 100%)
Gene name: CTHT_0014630
Sequence domains: Ribosomal protein S27
40S ribosomal protein S28-like protein Chain: Sc
Molecule details ›
Chain: Sc
Length: 68 amino acids
Theoretical weight: 7.74 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0S9M9 (Residues: 1-68; Coverage: 100%)
Gene name: CTHT_0046470
Sequence domains: Ribosomal protein S28e
40S ribosomal protein S29 Chain: Sd
Molecule details ›
Chain: Sd
Length: 56 amino acids
Theoretical weight: 6.5 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: Q2HB68 (Residues: 1-56; Coverage: 100%)
Gene name: CHGG_02536
Sequence domains: Ribosomal protein S14p/S29e
40S ribosomal protein S30 Chain: Se
Molecule details ›
Chain: Se
Length: 61 amino acids
Theoretical weight: 6.79 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: Q2H4C5 (Residues: 5-62; Coverage: 94%)
Gene name: CHGG_06490
Sequence domains: Ribosomal protein S30
Ubiquitin-like domain-containing protein Chain: Sf
Molecule details ›
Chain: Sf
Length: 154 amino acids
Theoretical weight: 17.73 KDa
Source organism: Thermochaetoides thermophila
UniProt:
  • Canonical: G0S2X5 (Residues: 1-154; Coverage: 100%)
Gene name: CTHT_0018840
Sequence domains:
Methionine aminopeptidase 2 Chain: D
Molecule details ›
Chain: D
Length: 371 amino acids
Theoretical weight: 41.31 KDa
Source organism: Thermochaetoides thermophila
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: G0SEA9 (Residues: 74-444; Coverage: 84%)
Gene name: CTHT_0063100
Sequence domains: Metallopeptidase family M24
28S ribosomal RNA Chain: 1
Molecule details ›
Chain: 1
Length: 3337 nucleotides
Theoretical weight: 1078.73 KDa
Sequence domains: Eukaryotic large subunit ribosomal RNA
18S Ribosomal RNA Chain: 2
Molecule details ›
Chain: 2
Length: 1796 nucleotides
Theoretical weight: 578.89 KDa
Sequence domains: Eukaryotic small subunit ribosomal RNA
5S ribosomal RNA Chain: 3
Molecule details ›
Chain: 3
Length: 120 nucleotides
Theoretical weight: 38.6 KDa
Sequence domains: 5S ribosomal RNA
5.8S ribosomal RNA Chain: 4
Molecule details ›
Chain: 4
Length: 156 nucleotides
Theoretical weight: 50.15 KDa
Sequence domains: 5.8S ribosomal RNA

Ligands and Environments

1 bound ligand:
Ligand ZN 8 x ZN
2 modified residues:
Ligand OMG 1 x OMG
Ligand SAC 1 x SAC

Experiments and Validation Details

Entry percentile scores
Resolution: 3.1Å
Relevant EMDB volumes: EMD-17004
Expression system: Spodoptera frugiperda

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