› 8pob

X-ray diffraction
1.74Å resolution

Crystal structure of Hen Egg White Lysozyme co-crystallized with 10 mM TbXo4-SO3

Released:
DOI: 10.2210/pdb8pob/pdb
PDB entry 8pob coloured by chain, front view.
PDB entry 8pob coloured by chain, side view.
PDB entry 8pob coloured by chain, top view.
Source organism: Gallus gallus
Primary publication:
Influence of Chemical Modifications of the Crystallophore on Protein Nucleating Properties and Supramolecular Interactions Network.
Roux A, Alsalman Z, Jiang T, Mulatier JC, Pitrat D, Dumont E, Riobé F, Gillet N, Girard E, Maury O
Chemistry e202400900 (2024)
PMID: 38738452

Function and Biology Details

Reaction catalysed: 
Hydrolysis of (1->4)-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins
Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-132831 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Lysozyme C Chain: A
Molecule details ›
Chain: A
Length: 147 amino acids
Theoretical weight: 16.26 KDa
Source organism: Gallus gallus
UniProt:
  • Canonical: P00698 (Residues: 1-147; Coverage: 100%)
Gene name: LYZ
Sequence domains: C-type lysozyme/alpha-lactalbumin family

Ligands and Environments

4 bound ligands:
Ligand TB 2 x TB
Ligand ZW0 1 x ZW0
Ligand CL 6 x CL
Ligand NA 1 x NA
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SOLEIL BEAMLINE PROXIMA 1
Spacegroup: P43212
Unit cell:
a: 77.404Å b: 77.404Å c: 37.602Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.183 0.18 0.228

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