› 8q29

X-ray diffraction
1.5Å resolution

TtX122A - A domain of unknown function from the Teredinibacter turnerae protein TERTU_3803

Released:
DOI: 10.2210/pdb8q29/pdb
PDB entry 8q29 coloured by chain, front view.
PDB entry 8q29 coloured by chain, side view.
PDB entry 8q29 coloured by chain, top view.
Source organism: Teredinibacter turnerae
Primary publication:
Structural dissection of two redox proteins from the shipworm symbiont Teredinibacter turnerae.
Rajagopal BS, Yates N, Smith J, Paradisi A, Tétard-Jones C, Willats WGT, Marcus S, Knox JP, Firdaus-Raih M, Henrissat B, Davies GJ, Walton PH, Parkin A, Hemsworth GR
IUCrJ 11 260-274 (2024)
PMID: 38446458

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-270096 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Gluconolactonase domain protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 248 amino acids
Theoretical weight: 27.45 KDa
Source organism: Teredinibacter turnerae
Expression system: Escherichia coli
UniProt:
  • Canonical: C5BSV8 (Residues: 124-363; Coverage: 13%)
Gene name: TERTU_3803

Ligands and Environments

3 bound ligands:
Ligand CA 2 x CA
Ligand MG 4 x MG
Ligand EDO 6 x EDO
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I04
Spacegroup: P21
Unit cell:
a: 48.081Å b: 75.167Å c: 69.074Å
α: 90° β: 107.423° γ: 90°
R-values:
R R work R free
0.114 0.112 0.156
Expression system: Escherichia coli

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