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CryoEM structure of wheat 40S ribosomal subunit, head domain

Source organism: Triticum aestivum
Biochemical function: structural constituent of ribosome
Biological process: translation
Cellular component: ribosome

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GO terms

Biochemical function:
Biological process:
Cellular component:

Sequence families

Pfam Protein families (Pfam)
PF00400
Domain description: WD domain, G-beta repeat
Occurring in:
  1. Ribosomal protein RACK1 subfamily. WD repeat G protein beta family
The deposited structure of PDB entry 8r57 contains 7 copies of Pfam domain PF00400 (WD domain, G-beta repeat) in Ribosomal protein RACK1 subfamily. WD repeat G protein beta family. Showing 7 copies in chain K [auth g].

PF00833
Domain description: Ribosomal S17
Occurring in:
  1. 40S ribosomal protein S17
The deposited structure of PDB entry 8r57 contains 1 copy of Pfam domain PF00833 (Ribosomal S17) in 40S ribosomal protein S17. Showing 1 copy in chain N [auth h].

PF01599
Domain description: Ribosomal protein S27a
Occurring in:
  1. Ubiquitin-like domain-containing protein
The deposited structure of PDB entry 8r57 contains 1 copy of Pfam domain PF01599 (Ribosomal protein S27a) in Ubiquitin-like domain-containing protein. Showing 1 copy in chain P [auth f].

PF00240
Domain description: Ubiquitin family
Occurring in:
  1. Ubiquitin-like domain-containing protein
The deposited structure of PDB entry 8r57 contains 1 copy of Pfam domain PF00240 (Ubiquitin family) in Ubiquitin-like domain-containing protein. Showing 1 copy in chain P [auth f] (this domain is out of the observed residue ranges!).

PF00253
Domain description: Ribosomal protein S14p/S29e
Occurring in:
  1. Small ribosomal subunit protein uS14
The deposited structure of PDB entry 8r57 contains 1 copy of Pfam domain PF00253 (Ribosomal protein S14p/S29e) in Small ribosomal subunit protein uS14. Showing 1 copy in chain J [auth d].

PF01200
Domain description: Ribosomal protein S28e
Occurring in:
  1. 40S ribosomal protein S28
The deposited structure of PDB entry 8r57 contains 1 copy of Pfam domain PF01200 (Ribosomal protein S28e) in 40S ribosomal protein S28. Showing 1 copy in chain I [auth c].

PF03297
Domain description: S25 ribosomal protein
Occurring in:
  1. 40S ribosomal protein S25
The deposited structure of PDB entry 8r57 contains 1 copy of Pfam domain PF03297 (S25 ribosomal protein) in 40S ribosomal protein S25. Showing 1 copy in chain H [auth Z].

PF00338
Domain description: Ribosomal protein S10p/S20e
Occurring in:
  1. Small ribosomal subunit protein uS10 domain-containing protein
The deposited structure of PDB entry 8r57 contains 1 copy of Pfam domain PF00338 (Ribosomal protein S10p/S20e) in Small ribosomal subunit protein uS10 domain-containing protein. Showing 1 copy in chain F [auth U].

PF01090
Domain description: Ribosomal protein S19e
Occurring in:
  1. 40S ribosomal protein S19
The deposited structure of PDB entry 8r57 contains 1 copy of Pfam domain PF01090 (Ribosomal protein S19e) in 40S ribosomal protein S19. Showing 1 copy in chain G [auth T].

PF00416
Domain description: Ribosomal protein S13/S18
Occurring in:
  1. Putative ribosomal protein S18
The deposited structure of PDB entry 8r57 contains 1 copy of Pfam domain PF00416 (Ribosomal protein S13/S18) in Putative ribosomal protein S18. Showing 1 copy in chain L [auth S].

PF00203
Domain description: Ribosomal protein S19
Occurring in:
  1. 40S ribosomal protein S15
The deposited structure of PDB entry 8r57 contains 1 copy of Pfam domain PF00203 (Ribosomal protein S19) in 40S ribosomal protein S15. Showing 1 copy in chain M [auth R].

PF00380
Domain description: Ribosomal protein S9/S16
Occurring in:
  1. 40S ribosomal protein S16
The deposited structure of PDB entry 8r57 contains 1 copy of Pfam domain PF00380 (Ribosomal protein S9/S16) in 40S ribosomal protein S16. Showing 1 copy in chain E [auth Q].

PF00177
Domain description: Ribosomal protein S7p/S5e
Occurring in:
  1. Small ribosomal subunit protein uS7c
The deposited structure of PDB entry 8r57 contains 1 copy of Pfam domain PF00177 (Ribosomal protein S7p/S5e) in Small ribosomal subunit protein uS7c. Showing 1 copy in chain D [auth P].

PF01248
Domain description: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
Occurring in:
  1. 40S ribosomal protein S12
The deposited structure of PDB entry 8r57 contains 1 copy of Pfam domain PF01248 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family) in 40S ribosomal protein S12. Showing 1 copy in chain B [auth M].

PF03501
Domain description: Plectin/S10 domain
Occurring in:
  1. Plectin/eS10 N-terminal domain-containing protein
The deposited structure of PDB entry 8r57 contains 1 copy of Pfam domain PF03501 (Plectin/S10 domain) in Plectin/eS10 N-terminal domain-containing protein. Showing 1 copy in chain A [auth K].

PF00189
Domain description: Ribosomal protein S3, C-terminal domain
Occurring in:
  1. 30S ribosomal protein S3, chloroplastic
The deposited structure of PDB entry 8r57 contains 1 copy of Pfam domain PF00189 (Ribosomal protein S3, C-terminal domain) in 30S ribosomal protein S3, chloroplastic. Showing 1 copy in chain C [auth F].

PF07650
Domain description: KH domain
Occurring in:
  1. 30S ribosomal protein S3, chloroplastic
The deposited structure of PDB entry 8r57 contains 1 copy of Pfam domain PF07650 (KH domain) in 30S ribosomal protein S3, chloroplastic. Showing 1 copy in chain C [auth F].

Rfam RNA family (Rfam)
RF01960
Domain description: Eukaryotic small subunit ribosomal RNA
Occurring in:
  1. RNA (458-MER)
The deposited structure of PDB entry 8r57 contains 1 copy of Rfam domain RF01960 (Eukaryotic small subunit ribosomal RNA) in RNA (458-MER). Showing 1 copy in chain O [auth A].

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