› 8rjh

X-ray diffraction
2.6Å resolution

HLA A*2402-NF9_6F pMHC complex

Released:
DOI: 10.2210/pdb8rjh/pdb
Model geometry
Fit model/data
PDB entry 8rjh coloured by chain, front view.
PDB entry 8rjh coloured by chain, side view.
PDB entry 8rjh coloured by chain, top view.
Source organisms:
Entry authors: Wall A, Sewell AK, Motozono C, Rizkallah PJ, Fuller A

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:

Structure analysis Details

Assembly composition:
hetero trimer (preferred)
PDBe Complex ID:
PDB-CPX-283714 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
Ig-like domain-containing protein Chains: A, D, G, J, M, P
Molecule details ›
Chains: A, D, G, J, M, P
Length: 276 amino acids
Theoretical weight: 31.78 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: A0A411J078 (Residues: 25-300; Coverage: 87%)
Gene name: HLA-A
Sequence domains:
Beta-2-microglobulin Chains: B, E, H, K, N, Q
Molecule details ›
Chains: B, E, H, K, N, Q
Length: 100 amino acids
Theoretical weight: 11.88 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P61769 (Residues: 21-119; Coverage: 100%)
Gene names: B2M, CDABP0092, HDCMA22P
Sequence domains: Immunoglobulin C1-set domain
Spike protein S1 Chains: C, F, I, L, O, R

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this entry.
X-ray source: DIAMOND BEAMLINE I04
Spacegroup: C2
Unit cell:
a: 344.797Å b: 84.336Å c: 91.453Å
α: 90° β: 102.14° γ: 90°
R-values:
R R work R free
0.226 0.224 0.264
Expression systems:
  • Escherichia coli
  • Not provided

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