› 8tdx

X-ray diffraction
2.09Å resolution

TRNM-b.01 in complex with HIV Env fusion peptide

Released:
DOI: 10.2210/pdb8tdx/pdb
PDB entry 8tdx coloured by chain, front view.
PDB entry 8tdx coloured by chain, side view.
PDB entry 8tdx coloured by chain, top view.
Source organisms:
Entry authors: Olia AS, Kwong PD

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-246925 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
TRNM-b.01 Fab Heavy Chain Chains: A, B
Molecule details ›
Chains: A, B
Length: 227 amino acids
Theoretical weight: 24.83 KDa
Source organism: Macaca mulatta
Expression system: Homo sapiens
TRNM-b.01 Fab Light Chain Chains: C, D
Molecule details ›
Chains: C, D
Length: 213 amino acids
Theoretical weight: 23.05 KDa
Source organism: Macaca mulatta
Expression system: Homo sapiens
Transmembrane protein gp41 Chains: E, F
Molecule details ›
Chains: E, F
Length: 8 amino acids
Theoretical weight: 733 Da
Source organism: Human immunodeficiency virus 1
Expression system: Not provided
UniProt:
  • Canonical: P12489 (Residues: 524-531; Coverage: 1%)
Gene name: env

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 24-ID-E
Spacegroup: P212121
Unit cell:
a: 84.464Å b: 88.926Å c: 129.108Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.206 0.204 0.24
Expression systems:
  • Homo sapiens
  • Not provided

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