› 8tjy

Electron Microscopy
2.79Å resolution

Structure of Gabija AB complex

Released:
DOI: 10.2210/pdb8tjy/pdb
PDB entry 8tjy coloured by chain, front view.
PDB entry 8tjy coloured by chain, side view.
PDB entry 8tjy coloured by chain, top view.
Source organism: Bacillus cereus
Primary publication:
Molecular basis of Gabija anti-phage supramolecular assemblies.
Yang XY, Shen Z, Xie J, Greenwald J, Marathe I, Lin Q, Xie WJ, Wysocki VH, Fu TM
Nat Struct Mol Biol (2024)
PMID: 38627580
Related structures: EMD-41314

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero octamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-235705 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Endonuclease GajA Chains: A, C, E, G
Molecule details ›
Chains: A, C, E, G
Length: 578 amino acids
Theoretical weight: 67.08 KDa
Source organism: Bacillus cereus
Expression system: Escherichia coli
UniProt:
  • Canonical: J8H9C1 (Residues: 1-578; Coverage: 100%)
Gene names: IIE_04982, gajA
Sequence domains:
Gabija protein GajB Chains: B, D, F, H
Molecule details ›
Chains: B, D, F, H
Length: 494 amino acids
Theoretical weight: 57.14 KDa
Source organism: Bacillus cereus
Expression system: Escherichia coli
UniProt:
  • Canonical: J8HQ06 (Residues: 1-494; Coverage: 100%)
Gene names: IIE_04983, gajB
Sequence domains:

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 2.79Å
Relevant EMDB volumes: EMD-41314
Expression system: Escherichia coli

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