› 8toc

Electron Microscopy
3.11Å resolution

Acinetobacter phage AP205

Released:
DOI: 10.2210/pdb8toc/pdb
PDB entry 8toc coloured by chain, front view.
PDB entry 8toc coloured by chain, side view.
PDB entry 8toc coloured by chain, top view.
Source organism: Acinetobacter phage AP205
Primary publication:
Structural basis of Acinetobacter type IV pili targeting by an RNA virus.
Meng R, Xing Z, Chang JY, Yu Z, Thongchol J, Xiao W, Wang Y, Chamakura K, Zeng Z, Wang F, Young R, Zeng L, Zhang J
OpenAccess logo Nat Commun 15 2746 (2024)
PMID: 38553443
Related structures: EMD-41443

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:

Structure analysis Details

Assembly composition:
hetero 181-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-573404 (preferred)
Entry contents:
2 distinct polypeptide molecules
1 distinct RNA molecule
Macromolecules (3 distinct):
Maturation protein Chains: a, b
Molecule details ›
Chains: a, b
Length: 534 amino acids
Theoretical weight: 61.06 KDa
Source organism: Acinetobacter phage AP205
UniProt:
  • Canonical: Q9AZ43 (Residues: 1-534; Coverage: 100%)
Sequence domains: Phage maturation protein
AP205 coat protein domain-containing protein Chains: AB, AC, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP, AQ, AS, AT, AU, AV, AW, AX, AY, AZ, Ac, BA, BB, BC, BD, BE, BF, BG, BH, BI, BJ, BK, BL, BM, BN, BO, BP, BQ, BS, BT, BU, BV, BW, BX, BY, BZ, Bc, CA, CB, CC, CD, CE, CF, CG, CH, CI, CJ, CK, CL, CM, CN, CO, CP, CQ, CS, CT, CU, CV, CW, CX, CY, CZ, Cc, DA, DB, DC, DD, DE, DF, DG, DH, DI, DJ, DK, DL, DM, DN, DO, DQ, DS, DT, DU, DV, DW, DX, DY, DZ, Dc, EA, EB, EC, ED, EE, EF, EG, EH, EI, EJ, EK, EL, EM, EN, EO, EP, EQ, ES, ET, EU, EV, EW, EX, EY, EZ, Ec, FA, FB, FC, FD, FE, FF, FG, FH, FI, FJ, FK, FL, FM, FN, FO, FP, FQ, FS, FT, FU, FV, FW, FX, FY, FZ, Fc, GA, GB, GC, GD, GE, GF, GG, GH, GI, GJ, GK, GL, GM, GN, GO, GP, GQ, GS, GT, GU, GV, GW, GX, GY, Gc
Molecule details ›
Chains: AB, AC, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP, AQ, AS, AT, AU, AV, AW, AX, AY, AZ, Ac, BA, BB, BC, BD, BE, BF, BG, BH, BI, BJ, BK, BL, BM, BN, BO, BP, BQ, BS, BT, BU, BV, BW, BX, BY, BZ, Bc, CA, CB, CC, CD, CE, CF, CG, CH, CI, CJ, CK, CL, CM, CN, CO, CP, CQ, CS, CT, CU, CV, CW, CX, CY, CZ, Cc, DA, DB, DC, DD, DE, DF, DG, DH, DI, DJ, DK, DL, DM, DN, DO, DQ, DS, DT, DU, DV, DW, DX, DY, DZ, Dc, EA, EB, EC, ED, EE, EF, EG, EH, EI, EJ, EK, EL, EM, EN, EO, EP, EQ, ES, ET, EU, EV, EW, EX, EY, EZ, Ec, FA, FB, FC, FD, FE, FF, FG, FH, FI, FJ, FK, FL, FM, FN, FO, FP, FQ, FS, FT, FU, FV, FW, FX, FY, FZ, Fc, GA, GB, GC, GD, GE, GF, GG, GH, GI, GJ, GK, GL, GM, GN, GO, GP, GQ, GS, GT, GU, GV, GW, GX, GY, Gc
Length: 129 amino acids
Theoretical weight: 13.82 KDa
Source organism: Acinetobacter phage AP205
UniProt:
  • Canonical: Q9AZ42 (Residues: 2-130; Coverage: 99%)
Sequence domains: AP205 coat protein
RNA (4269-MER) Chain: R
Molecule details ›
Chain: R
Length: 4269 nucleotides
Theoretical weight: 1368.51 KDa

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.11Å
Relevant EMDB volumes: EMD-41443

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