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Axle-less Bacillus sp. PS3 F1 ATPase mutant

Electron Microscopy
3Å resolution
PDB entry 8u1h coloured by chain, front view.
PDB entry 8u1h coloured by chain, side view.
PDB entry 8u1h coloured by chain, top view.
Source organism: Bacillus sp. PS3
Assembly composition:
hetero heptamer (preferred)
Entry contents: 3 distinct polypeptide molecules

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Assemblies

Assembly 1 (preferred)
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Assembly Name: ATP synthase
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Multimeric state: hetero heptamer
Accessible surface area: 99233.09 Å2
Buried surface area: 34761.22 Å2
Dissociation area: 1,312.36 Å2
Dissociation energy (ΔGdiss): 7.14 kcal/mol
Dissociation entropy (TΔSdiss): 13.64 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-281477

Macromolecules

ATP synthase subunit alpha
Chains: A, B, C
Length: 502 amino acids
Theoretical weight: 54.91 KDa
Source organism: Bacillus sp. PS3
Expression system: Escherichia coli
UniProt:
  • Canonical: P09219 (Residues: 1-502; Coverage: 100%)
Gene name: atpA
Pfam:
ATP synthase subunit alpha in PDB entry 8u1h, assembly 1, front view.
ATP synthase subunit alpha in PDB entry 8u1h, assembly 1, side view.
ATP synthase subunit alpha in PDB entry 8u1h, assembly 1, top view.
PDBe-KB: UniProt Coverage View: P09219  
150250100150200250300350400450500
 
200400MSIRAEEISALIKQQIENYESQIQVSDVGTVIQVGDGIARAHGLDNVMSGELVEFANGVMGMALNLEENNVGIVILGPYTGIKEGDEVRRTGRIMEVPVGEALIGRVVNPLGQPVDGLGPVETTETRPIESRAPGVMDRRSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSVAIDTIINQKDQNMISIYVAIGQKESTVRTVVETLRKHGALDYTIVVTASASQPAPLLFLAPYAGVAMGEYFMYKGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDIFYLHSRLLERAAKLSDAKGGGSLTALPFVETQAGDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVSRVGGAAQIKAMKKVAGTLRLDLAAYRELEAFAQFGSDLDKATQAKLARGARTVEVLKQDLHQPIPVEKQVLIIYALTRGFLDDIPVEDVRRFEKEFYLFLDQNGQHLLEHIRTTKDLPNEDDLNKAIEAFKKTFVVSQ
UniProt
P09219
Chains
Secondary structure
Ligand binding sites
Interaction interfaces
Sequence conservation
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ATP synthase subunit beta
Chains: D, E, F
Length: 484 amino acids
Theoretical weight: 53.42 KDa
Source organism: Bacillus sp. PS3
Expression system: Escherichia coli
UniProt:
  • Canonical: P07677 (Residues: 1-473; Coverage: 100%)
Gene name: atpD
Pfam:
ATP synthase subunit beta in PDB entry 8u1h, assembly 1, front view.
ATP synthase subunit beta in PDB entry 8u1h, assembly 1, side view.
ATP synthase subunit beta in PDB entry 8u1h, assembly 1, top view.
PDBe-KB: UniProt Coverage View: P07677  
148450100150200250300350400450
 
200400MHHHHHHHHHHMTRGRVIQVMGPVVDVKFENGHLPAIYNALKIQHKARNENEVDIDLTLEVALHLGDDTVRTIAMASTDGLIRGMEVIDTGAPISVPVGEVTLGRVFNVLGEPIDLEGDIPADARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVISKTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTAKGSITSIQAIYVPADDYTDPAPATTFSHLDATTNLERKLAEMGIYPAVDPLASTSRALAPEIVGEEHYQVARKVQQTLQRYKELQDIIAILGMDELSDEDKLVVHRARRIQFFLSQNFHVAEQFTGQPGSYVPVKETVRGFKEILEGKYDHLPEDAFRLVGRIEEVVEKAKAMGVEV
UniProt
P07677
Chains
Secondary structure
Ligand binding sites
Interaction interfaces
Sequence conservation
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ATP synthase gamma chain
Chain: G
Length: 263 amino acids
Theoretical weight: 29.68 KDa
Source organism: Bacillus sp. PS3
Expression system: Escherichia coli
UniProt:
  • Canonical: P09222 (Residues: 9-41, 42-63, 64-198, 199-261; Coverage: 89%)
Gene name: atpG
Pfam: ATP synthase
ATP synthase gamma chain in PDB entry 8u1h, assembly 1, front view.
ATP synthase gamma chain in PDB entry 8u1h, assembly 1, side view.
ATP synthase gamma chain in PDB entry 8u1h, assembly 1, top view.
PDBe-KB: UniProt Coverage View: P09222  
126320406080100120140160180200220240260
 
100200MDIKTRINATKKTSQITKAMEMVSTSKLNRAEQNAKSFVPYMEKIQEVVANVALGAGGASHPMLVSRPVKKTGYLVITSDRGLAGAYNSNVLRLVYQTIQKRHACPDEYAIIVIGRVGLSFFRKRNMPVILDITRLPDQPSFADIKEIARKTVGLFADGTFDELYMYYNHYVSAIQQEVTERKLLPLTDLAENWSHPQFEKQRTVYEFEPSQEECLDVLLPQYAESLIYGALLDAKASEHAARMTAMKNATDNANELIRTLTL
UniProt
P09222
Chains
Secondary structure
Interaction interfaces
Sequence conservation
Molecule details ›

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