› 8uyp

Electron Microscopy
7.1Å resolution

SARS-CoV-1 5' proximal stem-loop 5

Released:
DOI: 10.2210/pdb8uyp/pdb
PDB entry 8uyp coloured by chain, ensemble of 20 models, front view.
PDB entry 8uyp coloured by chain, ensemble of 20 models, side view.
PDB entry 8uyp coloured by chain, ensemble of 20 models, top view.
Source organism: SARS coronavirus Tor2
Primary publication:
Tertiary folds of the SL5 RNA from the 5' proximal region of SARS-CoV-2 and related coronaviruses.
Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R
Proc Natl Acad Sci U S A 121 e2320493121 (2024)
PMID: 38427602
Related structures: EMD-42816

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-238430 (preferred)
Entry contents:
1 distinct RNA molecule
Macromolecule:
SARS-CoV-1 5' proximal stem-loop 5 Chain: A
Molecule details ›
Chain: A
Length: 143 nucleotides
Theoretical weight: 45.92 KDa
Source organism: SARS coronavirus Tor2
Expression system: Not provided
Sequence domains: Sarbecovirus 5'UTR

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 7.1Å
Relevant EMDB volumes: EMD-42816
Expression system: Not provided

Quick links

Citations

1 mention without citation

Tertiary folds of the SL5 RNA from the 5' proximal region of SARS-CoV-2 and related coronaviruses.
Kretsch et al. (2023)