› 8vrd

Electron Microscopy
7Å resolution

Rigid body fitted model for free recombinant gamma tubulin ring complex.

Released:
DOI: 10.2210/pdb8vrd/pdb
PDB entry 8vrd coloured by chain, front view.
PDB entry 8vrd coloured by chain, side view.
PDB entry 8vrd coloured by chain, top view.
Source organism: Homo sapiens
Entry authors: Aher A, Urnavicius L, Kapoor TM
Related structures: EMD-43481

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:

Structure analysis Details

Assembly composition:
hetero 34-mer (preferred)
PDBe Complex ID:
PDB-CPX-245772 (preferred)
Entry contents:
8 distinct polypeptide molecules
Macromolecules (8 distinct):
Gamma-tubulin complex component 3 Chains: B, D, F, H, N, O
Molecule details ›
Chains: B, D, F, H, N, O
Length: 907 amino acids
Theoretical weight: 103.71 KDa
Source organism: Homo sapiens
Expression system: Trichoplusia ni
UniProt:
  • Canonical: Q96CW5 (Residues: 1-907; Coverage: 100%)
Gene names: GCP3, TUBGCP3
Sequence domains:
Gamma-tubulin complex component 6 Chains: L, P, T
Molecule details ›
Chains: L, P, T
Length: 1811 amino acids
Theoretical weight: 199.73 KDa
Source organism: Homo sapiens
Expression system: Trichoplusia ni
UniProt:
  • Canonical: Q96RT7 (Residues: 1-1819; Coverage: 100%)
Gene names: GCP6, KIAA1669, TUBGCP6
Sequence domains:
Mitotic-spindle organizing protein 1 Chains: Q, R
Molecule details ›
Chains: Q, R
Length: 82 amino acids
Theoretical weight: 8.49 KDa
Source organism: Homo sapiens
Expression system: Trichoplusia ni
UniProt:
  • Canonical: Q08AG7 (Residues: 1-82; Coverage: 100%)
Gene names: C13orf37, MOZART1, MZT1
Sequence domains: Mitotic-spindle organizing gamma-tubulin ring associated
Actin, cytoplasmic 1 Chain: S
Molecule details ›
Chain: S
Length: 375 amino acids
Theoretical weight: 41.78 KDa
Source organism: Homo sapiens
Expression system: Trichoplusia ni
UniProt:
  • Canonical: P60709 (Residues: 1-375; Coverage: 100%)
Gene name: ACTB
Sequence domains: Actin
Gamma-tubulin complex component 2 Chains: A, C, E, G, M
Molecule details ›
Chains: A, C, E, G, M
Length: 930 amino acids
Theoretical weight: 105.58 KDa
Source organism: Homo sapiens
Expression system: Trichoplusia ni
UniProt:
  • Canonical: Q9BSJ2 (Residues: 1-205, 206-902; Coverage: 100%)
  • Best match: Q9BSJ2-4 (Residues: 1-930)
Gene names: GCP2, TUBGCP2
Sequence domains:
Tubulin gamma-1 chain Chains: a, b, c, d, e, f, g, h, i, j, k, l, m, n
Molecule details ›
Chains: a, b, c, d, e, f, g, h, i, j, k, l, m, n
Length: 457 amino acids
Theoretical weight: 52.02 KDa
Source organism: Homo sapiens
Expression system: Trichoplusia ni
UniProt:
  • Canonical: P23258 (Residues: 1-451; Coverage: 100%)
Gene names: TUBG, TUBG1
Sequence domains:
Gamma-tubulin complex component 4 Chains: I, K
Molecule details ›
Chains: I, K
Length: 666 amino acids
Theoretical weight: 76.11 KDa
Source organism: Homo sapiens
Expression system: Trichoplusia ni
UniProt:
  • Canonical: Q9UGJ1 (Residues: 1-667; Coverage: 100%)
Gene names: 76P, GCP4, TUBGCP4
Sequence domains:
Gamma-tubulin complex component 5 Chain: J
Molecule details ›
Chain: J
Length: 1024 amino acids
Theoretical weight: 118.37 KDa
Source organism: Homo sapiens
Expression system: Trichoplusia ni
UniProt:
  • Canonical: Q96RT8 (Residues: 1-1024; Coverage: 100%)
Gene names: GCP5, KIAA1899, TUBGCP5
Sequence domains:

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 7Å
Relevant EMDB volumes: EMD-43481
Expression system: Trichoplusia ni

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