› 8vva

X-ray diffraction
1.75Å resolution

Structure of DUF1480 domain-containing protein from Klebsiella pneumoniae subsp. pneumoniae SA1

Released:
DOI: 10.2210/pdb8vva/pdb
PDB entry 8vva coloured by chain, front view.
PDB entry 8vva coloured by chain, side view.
PDB entry 8vva coloured by chain, top view.
Source organism: Klebsiella pneumoniae
Entry authors: Semper C, Savchenko A, Watanabe N, Center for Structural Biology of Infectious Diseases (CSBID)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-246076 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
YebV family protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 79 amino acids
Theoretical weight: 9.11 KDa
Source organism: Klebsiella pneumoniae
Expression system: Escherichia coli
UniProt:
  • Canonical: A0A6B2HLC6 (Residues: 24-102; Coverage: 78%)
Gene names: BVZ24_17880, G4V31_12545, GY104_15700, KPZU09_02820
Sequence domains: Protein of unknown function (DUF1480)

Ligands and Environments

No bound ligands
1 modified residue:
Ligand MSE 6 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: P41212
Unit cell:
a: 78.591Å b: 78.591Å c: 62.492Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.208 0.205 0.239
Expression system: Escherichia coli

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