8wif

Electron Microscopy
2.9Å resolution

Cryo- EM structure of Mycobacterium smegmatis 30S ribosomal subunit (body 2) of 70S ribosome and RafH.

Released:

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:

Structure analysis Details

Assembly composition:
hetero 23-mer (preferred)
PDBe Complex ID:
PDB-CPX-269762 (preferred)
Entry contents:
22 distinct polypeptide molecules
1 distinct RNA molecule
Macromolecules (23 distinct):
Ribosomal protein mS38 C-terminal domain-containing protein Chain: v
Molecule details ›
Chain: v
Length: 33 amino acids
Theoretical weight: 4.16 KDa
Source organism: Mycolicibacterium smegmatis MC2 155
UniProt:
  • Canonical: A0QR10 (Residues: 1-33; Coverage: 100%)
Gene name: MSMEG_0945
Sequence domains: Mitochondrial mRNA-processing protein COX24, C-terminal
Small ribosomal subunit protein uS3 Chain: d
Molecule details ›
Chain: d
Length: 275 amino acids
Theoretical weight: 30.19 KDa
Source organism: Mycolicibacterium smegmatis MC2 155
UniProt:
  • Canonical: A0QSD7 (Residues: 1-275; Coverage: 100%)
Gene names: MSMEG_1442, MSMEI_1406, rpsC
Sequence domains:
Small ribosomal subunit protein uS4 Chain: e
Small ribosomal subunit protein uS5 Chain: f
Small ribosomal subunit protein bS6 Chain: g
Small ribosomal subunit protein uS7 Chain: h
Small ribosomal subunit protein uS8 Chain: i
Small ribosomal subunit protein uS9 Chain: j
Small ribosomal subunit protein uS10 Chain: k
Small ribosomal subunit protein uS11 Chain: l
Small ribosomal subunit protein uS12 Chain: m
Small ribosomal subunit protein uS13 Chain: n
Small ribosomal subunit protein uS14A Chain: o
Small ribosomal subunit protein uS15 Chain: p
Small ribosomal subunit protein bS16 Chain: q
Small ribosomal subunit protein uS17 Chain: r
Small ribosomal subunit protein bS18B Chain: s
Small ribosomal subunit protein uS19 Chain: t
Small ribosomal subunit protein bS20 Chain: u
Small ribosomal subunit protein uS2 Chain: c
Large ribosomal subunit protein bL31 Chain: x
Sigma 54 modulation/S30EA ribosomal protein C-terminal domain-containing protein Chain: w
16S ribosomal RNA Chain: a

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 2.9Å
Relevant EMDB volumes: EMD-37565
Expression system: Escherichia coli BL21(DE3)