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Neryl diphosphate synthase from Solanum lycopersicum complexed with DMSAPP, IPP, and magnesium ion (form A)

X-ray diffraction
1.92Å resolution
PDB entry 8x35 coloured by chain, front view.
PDB entry 8x35 coloured by chain, side view.
PDB entry 8x35 coloured by chain, top view.
Source organism: Solanum lycopersicum
Assembly composition:
homo dimer (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: Dimethylallylcistransferase CPT1, chloroplastic
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Multimeric state: homo dimer
Accessible surface area: 19873.15 Å2
Buried surface area: 8008.15 Å2
Dissociation area: 3,055.93 Å2
Dissociation energy (ΔGdiss): 41.2 kcal/mol
Dissociation entropy (TΔSdiss): 13.72 kcal/mol
Symmetry number: 2
PDBe Complex ID: PDB-CPX-239590

Macromolecules

Dimethylallylcistransferase CPT1, chloroplastic
Chains: A, B
Length: 305 amino acids
Theoretical weight: 34.8 KDa
Source organism: Solanum lycopersicum
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: C1K5M2 (Residues: 1-303; Coverage: 100%)
Gene names: CPT1, NDPS1
Pfam: Putative undecaprenyl diphosphate synthase
Dimethylallylcistransferase CPT1, chloroplastic in PDB entry 8x35, assembly 1, front view.
Dimethylallylcistransferase CPT1, chloroplastic in PDB entry 8x35, assembly 1, side view.
Dimethylallylcistransferase CPT1, chloroplastic in PDB entry 8x35, assembly 1, top view.
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