› 8xms

X-ray diffraction
2.2Å resolution

Crystal structure of Porcine Circovirus type II Rep ATPase domain

Released:
DOI: 10.2210/pdb8xms/pdb
PDB entry 8xms coloured by chain, front view.
PDB entry 8xms coloured by chain, side view.
PDB entry 8xms coloured by chain, top view.
Source organism: Porcine circovirus 2
Primary publication:
Crystal structure of the ATPase domain of porcine circovirus type 2 Rep protein.
Guan S, Li Z, Han Y, Tian A, Zhou S, Chen H, Peng G, Song Y
J Gen Virol 105 (2024)
PMID: 38506716

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-183844 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Replication-associated protein Chains: A, B, C, D, E, F
Molecule details ›
Chains: A, B, C, D, E, F
Length: 163 amino acids
Theoretical weight: 18.85 KDa
Source organism: Porcine circovirus 2
Expression system: Escherichia coli
UniProt:
  • Canonical: Q8BB16 (Residues: 163-314; Coverage: 48%)
Gene names: ORF1, Rep
Sequence domains: RNA helicase

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRF BEAMLINE BL17U1
Spacegroup: P21
Unit cell:
a: 67.92Å b: 103.93Å c: 76.85Å
α: 90° β: 109.9° γ: 90°
R-values:
R R work R free
0.291 0.289 0.319
Expression system: Escherichia coli

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