› 8yby

Electron Microscopy
4.4Å resolution

State - I: Spike 2-up RBD with THSC20.HVTR26 (Fab26) - single Fab masked

Released:
DOI: 10.2210/pdb8yby/pdb
PDB entry 8yby coloured by chain, front view.
PDB entry 8yby coloured by chain, side view.
PDB entry 8yby coloured by chain, top view.
Source organisms:
Entry authors: Rencilin CF, Bhattacharya J, Dutta S
Related structures: EMD-34563

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero pentamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-285992 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
Spike glycoprotein Chains: B, D, E
Molecule details ›
Chains: B, D, E
Length: 1273 amino acids
Theoretical weight: 141.26 KDa
Source organism: Severe acute respiratory syndrome coronavirus
Expression system: Homo sapiens
UniProt:
  • Canonical: P0DTC2 (Residues: 1-1273; Coverage: 100%)
Gene names: 2, S
Sequence domains:
THSC20.HVTR26 (Fab26) - Heavy Chain Chain: A
Molecule details ›
Chain: A
Length: 231 amino acids
Theoretical weight: 24.23 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
THSC20.HVTR26 (Fab26) - Light Chain Chain: C

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this EM entry.
Resolution: 4.4Å
Relevant EMDB volumes: EMD-34563
Expression system: Homo sapiens

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