› 8yts

X-ray diffraction
1.15Å resolution

The structure of the cytochrome c546/556 from Thioalkalivibrio paradoxus with unusual UV-Vis spectral features at atomic resolution

Released:
DOI: 10.2210/pdb8yts/pdb
PDB entry 8yts coloured by chain, front view.
PDB entry 8yts coloured by chain, side view.
PDB entry 8yts coloured by chain, top view.
Source organism: Thioalkalivibrio paradoxus ARh 1
Entry authors: Varfolomeeva LA, Solovieva AY, Dergousova NI, Boyko KM, Tikhonova TV, Popov VO

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-275577 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Cytochrome c domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 105 amino acids
Theoretical weight: 11.03 KDa
Source organism: Thioalkalivibrio paradoxus ARh 1
UniProt:
  • Canonical: W0DLP1 (Residues: 1-105; Coverage: 100%)
Gene name: THITH_15890
Sequence domains: Cytochrome c

Ligands and Environments

1 bound ligand:
Ligand HEC 2 x HEC
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SPRING-8 BEAMLINE BL41XU
Spacegroup: P212121
Unit cell:
a: 36.416Å b: 37.601Å c: 97.117Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.116 0.114 0.144

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