› 8z07

X-ray diffraction
2.7Å resolution

The structure of HLA-A/peptide from virus

Released:
DOI: 10.2210/pdb8z07/pdb
Model geometry
Fit model/data
PDB entry 8z07 coloured by chain, front view.
PDB entry 8z07 coloured by chain, side view.
PDB entry 8z07 coloured by chain, top view.
Source organisms:
Entry authors: Yuechao H, Liu J

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero trimer (preferred)
PDBe Complex ID:
PDB-CPX-284406 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
Ig-like domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 274 amino acids
Theoretical weight: 31.55 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: A0A143Y4R2 (Residues: 25-298; Coverage: 100%)
Gene name: HLA-A
Sequence domains:
Beta-2-microglobulin Chain: B
Molecule details ›
Chain: B
Length: 99 amino acids
Theoretical weight: 11.75 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P61769 (Residues: 21-119; Coverage: 100%)
Gene names: B2M, CDABP0092, HDCMA22P
Sequence domains: Immunoglobulin C1-set domain
Spike protein S1 Chain: C

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this entry.
X-ray source: SSRF BEAMLINE BL02U1
Spacegroup: P21
Unit cell:
a: 50.526Å b: 67.24Å c: 78.177Å
α: 90° β: 101.31° γ: 90°
R-values:
R R work R free
0.214 0.21 0.289
Expression systems:
  • Escherichia coli
  • Not provided

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